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Items: 1 to 20 of 100

1.

Diel transcriptional response of a California Current plankton microbiome to light, low iron, and enduring viral infection.

Kolody BC, McCrow JP, Allen LZ, Aylward FO, Fontanez KM, Moustafa A, Moniruzzaman M, Chavez FP, Scholin CA, Allen EE, Worden AZ, Delong EF, Allen AE.

ISME J. 2019 Nov;13(11):2817-2833. doi: 10.1038/s41396-019-0472-2. Epub 2019 Jul 18.

2.

Pattern and synchrony of gene expression among sympatric marine microbial populations.

Ottesen EA, Young CR, Eppley JM, Ryan JP, Chavez FP, Scholin CA, DeLong EF.

Proc Natl Acad Sci U S A. 2013 Feb 5;110(6):E488-97. doi: 10.1073/pnas.1222099110. Epub 2013 Jan 23.

3.

Genomes and gene expression across light and productivity gradients in eastern subtropical Pacific microbial communities.

Dupont CL, McCrow JP, Valas R, Moustafa A, Walworth N, Goodenough U, Roth R, Hogle SL, Bai J, Johnson ZI, Mann E, Palenik B, Barbeau KA, Venter JC, Allen AE.

ISME J. 2015 May;9(5):1076-92. doi: 10.1038/ismej.2014.198. Epub 2014 Oct 21.

4.

Comparative metatranscriptomics identifies molecular bases for the physiological responses of phytoplankton to varying iron availability.

Marchetti A, Schruth DM, Durkin CA, Parker MS, Kodner RB, Berthiaume CT, Morales R, Allen AE, Armbrust EV.

Proc Natl Acad Sci U S A. 2012 Feb 7;109(6):E317-25. doi: 10.1073/pnas.1118408109. Epub 2012 Jan 18.

5.

Nutrient uplift in a cyclonic eddy increases diversity, primary productivity and iron demand of microbial communities relative to a western boundary current.

Doblin MA, Petrou K, Sinutok S, Seymour JR, Messer LF, Brown MV, Norman L, Everett JD, McInnes AS, Ralph PJ, Thompson PA, Hassler CS.

PeerJ. 2016 Apr 25;4:e1973. doi: 10.7717/peerj.1973. eCollection 2016.

6.

Transcriptional Orchestration of the Global Cellular Response of a Model Pennate Diatom to Diel Light Cycling under Iron Limitation.

Smith SR, Gillard JT, Kustka AB, McCrow JP, Badger JH, Zheng H, New AM, Dupont CL, Obata T, Fernie AR, Allen AE.

PLoS Genet. 2016 Dec 14;12(12):e1006490. doi: 10.1371/journal.pgen.1006490. eCollection 2016 Dec. Erratum in: PLoS Genet. 2017 Mar 29;13(3):e1006688.

7.

Divergent responses of Atlantic coastal and oceanic Synechococcus to iron limitation.

Mackey KR, Post AF, McIlvin MR, Cutter GA, John SG, Saito MA.

Proc Natl Acad Sci U S A. 2015 Aug 11;112(32):9944-9. doi: 10.1073/pnas.1509448112. Epub 2015 Jul 27.

8.

Shifting metabolic priorities among key protistan taxa within and below the euphotic zone.

Hu SK, Liu Z, Alexander H, Campbell V, Connell PE, Dyhrman ST, Heidelberg KB, Caron DA.

Environ Microbiol. 2018 Aug;20(8):2865-2879. doi: 10.1111/1462-2920.14259. Epub 2018 Jul 26.

PMID:
29708635
9.

Pervasive iron limitation at subsurface chlorophyll maxima of the California Current.

Hogle SL, Dupont CL, Hopkinson BM, King AL, Buck KN, Roe KL, Stuart RK, Allen AE, Mann EL, Johnson ZI, Barbeau KA.

Proc Natl Acad Sci U S A. 2018 Dec 26;115(52):13300-13305. doi: 10.1073/pnas.1813192115. Epub 2018 Dec 10.

10.

Microbial community transcriptional networks are conserved in three domains at ocean basin scales.

Aylward FO, Eppley JM, Smith JM, Chavez FP, Scholin CA, DeLong EF.

Proc Natl Acad Sci U S A. 2015 Apr 28;112(17):5443-8. doi: 10.1073/pnas.1502883112. Epub 2015 Mar 9.

11.

Marine diatom proteorhodopsins and their potential role in coping with low iron availability.

Marchetti A, Catlett D, Hopkinson BM, Ellis K, Cassar N.

ISME J. 2015 Dec;9(12):2745-8. doi: 10.1038/ismej.2015.74. Epub 2015 May 29.

12.

Dynamics and interactions of highly resolved marine plankton via automated high-frequency sampling.

Needham DM, Fichot EB, Wang E, Berdjeb L, Cram JA, Fichot CG, Fuhrman JA.

ISME J. 2018 Oct;12(10):2417-2432. doi: 10.1038/s41396-018-0169-y. Epub 2018 Jun 13.

13.

Diel Oscillation of Microbial Gene Transcripts Declines With Depth in Oligotrophic Ocean Waters.

Vislova A, Sosa OA, Eppley JM, Romano AE, DeLong EF.

Front Microbiol. 2019 Sep 24;10:2191. doi: 10.3389/fmicb.2019.02191. eCollection 2019.

14.

Phytoplankton carbon fixation gene (RuBisCO) transcripts and air-sea CO(2) flux in the Mississippi River plume.

John DE, Wang ZA, Liu X, Byrne RH, Corredor JE, López JM, Cabrera A, Bronk DA, Tabita FR, Paul JH.

ISME J. 2007 Oct;1(6):517-31. Epub 2007 Aug 30.

PMID:
18043653
15.

A microarray for assessing transcription from pelagic marine microbial taxa.

Shilova IN, Robidart JC, James Tripp H, Turk-Kubo K, Wawrik B, Post AF, Thompson AW, Ward B, Hollibaugh JT, Millard A, Ostrowski M, Scanlan DJ, Paerl RW, Stuart R, Zehr JP.

ISME J. 2014 Jul;8(7):1476-91. doi: 10.1038/ismej.2014.1. Epub 2014 Jan 30.

16.

Seasonal Synechococcus and Thaumarchaeal population dynamics examined with high resolution with remote in situ instrumentation.

Robidart JC, Preston CM, Paerl RW, Turk KA, Mosier AC, Francis CA, Scholin CA, Zehr JP.

ISME J. 2012 Mar;6(3):513-23. doi: 10.1038/ismej.2011.127. Epub 2011 Oct 6.

17.

A High-Resolution Time Series Reveals Distinct Seasonal Patterns of Planktonic Fungi at a Temperate Coastal Ocean Site (Beaufort, North Carolina, USA).

Duan Y, Xie N, Song Z, Ward CS, Yung CM, Hunt DE, Johnson ZI, Wang G.

Appl Environ Microbiol. 2018 Oct 17;84(21). pii: e00967-18. doi: 10.1128/AEM.00967-18. Print 2018 Nov 1.

18.

Whole-genome expression analysis reveals a role for death-related genes in stress acclimation of the diatom Thalassiosira pseudonana.

Thamatrakoln K, Korenovska O, Niheu AK, Bidle KD.

Environ Microbiol. 2012 Jan;14(1):67-81. doi: 10.1111/j.1462-2920.2011.02468.x. Epub 2011 Mar 31.

PMID:
21453404
19.

Qualitative importance of the microbial loop and plankton community structure in a eutrophic lake during a bloom of cyanobacteria.

Christoffersen K, Riemann B, Hansen LR, Klysner A, Sørensen HB.

Microb Ecol. 1990 Dec;20(1):253-72. doi: 10.1007/BF02543881.

PMID:
24193978
20.

Mixotrophy in the Marine Plankton.

Stoecker DK, Hansen PJ, Caron DA, Mitra A.

Ann Rev Mar Sci. 2017 Jan 3;9:311-335. doi: 10.1146/annurev-marine-010816-060617. Epub 2016 Jul 6.

PMID:
27483121

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