Similar articles for PMID: 31119032

Year	Number of Results
2005	1
2007	2
2008	1
2009	3
2010	2
2011	4
2012	4
2013	3
2014	9
2015	3
2016	12
2017	9
2018	7
2019	12
2020	16
2021	12
2022	10
2023	6
2024	0

1

A Bioconductor workflow for the Bayesian analysis of spatial proteomics.

Crook OM, Breckels LM, Lilley KS, Kirk PDW, Gatto L. Crook OM, et al. F1000Res. 2019 Apr 11;8:446. doi: 10.12688/f1000research.18636.1. eCollection 2019. F1000Res. 2019. PMID: 31119032 Free PMC article.

2

A Bioconductor workflow for processing and analysing spatial proteomics data.

Breckels LM, Mulvey CM, Lilley KS, Gatto L. Breckels LM, et al. F1000Res. 2016 Dec 28;5:2926. doi: 10.12688/f1000research.10411.2. eCollection 2016. F1000Res. 2016. PMID: 30079225 Free PMC article.

3

Mass-spectrometry-based spatial proteomics data analysis using pRoloc and pRolocdata.

Gatto L, Breckels LM, Wieczorek S, Burger T, Lilley KS. Gatto L, et al. Bioinformatics. 2014 May 1;30(9):1322-4. doi: 10.1093/bioinformatics/btu013. Epub 2014 Jan 11. Bioinformatics. 2014. PMID: 24413670 Free PMC article.

4

Using hyperLOPIT to perform high-resolution mapping of the spatial proteome.

Mulvey CM, Breckels LM, Geladaki A, Britovšek NK, Nightingale DJH, Christoforou A, Elzek M, Deery MJ, Gatto L, Lilley KS. Mulvey CM, et al. Nat Protoc. 2017 Jun;12(6):1110-1135. doi: 10.1038/nprot.2017.026. Epub 2017 May 4. Nat Protoc. 2017. PMID: 28471460

5

Learning from Heterogeneous Data Sources: An Application in Spatial Proteomics.

Breckels LM, Holden SB, Wojnar D, Mulvey CM, Christoforou A, Groen A, Trotter MW, Kohlbacher O, Lilley KS, Gatto L. Breckels LM, et al. PLoS Comput Biol. 2016 May 13;12(5):e1004920. doi: 10.1371/journal.pcbi.1004920. eCollection 2016 May. PLoS Comput Biol. 2016. PMID: 27175778 Free PMC article.

6

A Bayesian mixture modelling approach for spatial proteomics.

Crook OM, Mulvey CM, Kirk PDW, Lilley KS, Gatto L. Crook OM, et al. PLoS Comput Biol. 2018 Nov 27;14(11):e1006516. doi: 10.1371/journal.pcbi.1006516. eCollection 2018 Nov. PLoS Comput Biol. 2018. PMID: 30481170 Free PMC article.

7

Inferring differential subcellular localisation in comparative spatial proteomics using BANDLE.

Crook OM, Davies CTR, Breckels LM, Christopher JA, Gatto L, Kirk PDW, Lilley KS. Crook OM, et al. Nat Commun. 2022 Oct 10;13(1):5948. doi: 10.1038/s41467-022-33570-9. Nat Commun. 2022. PMID: 36216816 Free PMC article.

8

An automated proteomic data analysis workflow for mass spectrometry.

Pendarvis K, Kumar R, Burgess SC, Nanduri B. Pendarvis K, et al. BMC Bioinformatics. 2009 Oct 8;10 Suppl 11(Suppl 11):S17. doi: 10.1186/1471-2105-10-S11-S17. BMC Bioinformatics. 2009. PMID: 19811682 Free PMC article.

9

Replication of single-cell proteomics data reveals important computational challenges.

Vanderaa C, Gatto L. Vanderaa C, et al. Expert Rev Proteomics. 2021 Oct;18(10):835-843. doi: 10.1080/14789450.2021.1988571. Epub 2021 Oct 25. Expert Rev Proteomics. 2021. PMID: 34602016

10

TOPPAS: a graphical workflow editor for the analysis of high-throughput proteomics data.

Junker J, Bielow C, Bertsch A, Sturm M, Reinert K, Kohlbacher O. Junker J, et al. J Proteome Res. 2012 Jul 6;11(7):3914-20. doi: 10.1021/pr300187f. Epub 2012 May 24. J Proteome Res. 2012. PMID: 22583024

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