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Items: 1 to 20 of 101

1.

Categorization of species as native or nonnative using DNA sequence signatures without a complete reference library.

Andersen JC, Oboyski P, Davies N, Charlat S, Ewing C, Meyer C, Krehenwinkel H, Lim JY, Noriyuki S, Ramage T, Gillespie RG, Roderick GK.

Ecol Appl. 2019 May 2:e01914. doi: 10.1002/eap.1914. [Epub ahead of print]

PMID:
31050090
2.

Performance of DNA metabarcoding, standard barcoding, and morphological approach in the identification of host-parasitoid interactions.

Šigut M, Kostovčík M, Šigutová H, Hulcr J, Drozd P, Hrček J.

PLoS One. 2017 Dec 13;12(12):e0187803. doi: 10.1371/journal.pone.0187803. eCollection 2017.

3.

Challenges to barcoding an entire flora.

Elliott TL, Jonathan Davies T.

Mol Ecol Resour. 2014 Sep;14(5):883-91. doi: 10.1111/1755-0998.12277. Epub 2014 May 28.

PMID:
24813242
4.

Building a DNA barcode library of Alaska's non-marine arthropods.

Sikes DS, Bowser M, Morton JM, Bickford C, Meierotto S, Hildebrandt K.

Genome. 2017 Mar;60(3):248-259. doi: 10.1139/gen-2015-0203. Epub 2016 Oct 21.

PMID:
28106469
5.

Barcoding and border biosecurity: identifying cyprinid fishes in the aquarium trade.

Collins RA, Armstrong KF, Meier R, Yi Y, Brown SD, Cruickshank RH, Keeling S, Johnston C.

PLoS One. 2012;7(1):e28381. doi: 10.1371/journal.pone.0028381. Epub 2012 Jan 20.

6.

Direct fishing and eDNA metabarcoding for biomonitoring during a 3-year survey significantly improves number of fish detected around a South East Asian reservoir.

Gillet B, Cottet M, Destanque T, Kue K, Descloux S, Chanudet V, Hughes S.

PLoS One. 2018 Dec 13;13(12):e0208592. doi: 10.1371/journal.pone.0208592. eCollection 2018.

7.

How many species and under what names? Using DNA barcoding and GenBank data for west Central African amphibian conservation.

Deichmann JL, Mulcahy DG, Vanthomme H, Tobi E, Wynn AH, Zimkus BM, McDiarmid RW.

PLoS One. 2017 Nov 13;12(11):e0187283. doi: 10.1371/journal.pone.0187283. eCollection 2017.

8.

The diversity and biogeography of the Coleoptera of Churchill: insights from DNA barcoding.

Woodcock TS, Boyle EE, Roughley RE, Kevan PG, Labbee RN, Smith AB, Goulet H, Steinke D, Adamowicz SJ.

BMC Ecol. 2013 Oct 29;13:40. doi: 10.1186/1472-6785-13-40.

9.

Spiders (Araneae) of Churchill, Manitoba: DNA barcodes and morphology reveal high species diversity and new Canadian records.

Blagoev GA, Nikolova NI, Sobel CN, Hebert PD, Adamowicz SJ.

BMC Ecol. 2013 Nov 26;13:44. doi: 10.1186/1472-6785-13-44.

10.

Estimating the biodiversity of terrestrial invertebrates on a forested island using DNA barcodes and metabarcoding data.

Dopheide A, Tooman LK, Grosser S, Agabiti B, Rhode B, Xie D, Stevens MI, Nelson N, Buckley TR, Drummond AJ, Newcomb RD.

Ecol Appl. 2019 Jun;29(4):e01877. doi: 10.1002/eap.1877. Epub 2019 Apr 8.

PMID:
30811075
11.

From barcoding single individuals to metabarcoding biological communities: towards an integrative approach to the study of global biodiversity.

Cristescu ME.

Trends Ecol Evol. 2014 Oct;29(10):566-71. doi: 10.1016/j.tree.2014.08.001. Epub 2014 Aug 28.

PMID:
25175416
12.

Barcoding snakeheads (Teleostei, Channidae) revisited: Discovering greater species diversity and resolving perpetuated taxonomic confusions.

Conte-Grand C, Britz R, Dahanukar N, Raghavan R, Pethiyagoda R, Tan HH, Hadiaty RK, Yaakob NS, Rüber L.

PLoS One. 2017 Sep 20;12(9):e0184017. doi: 10.1371/journal.pone.0184017. eCollection 2017.

13.

Assessing biodiversity of a freshwater benthic macroinvertebrate community through non-destructive environmental barcoding of DNA from preservative ethanol.

Hajibabaei M, Spall JL, Shokralla S, van Konynenburg S.

BMC Ecol. 2012 Dec 23;12:28. doi: 10.1186/1472-6785-12-28.

14.

A DNA barcode library for 5,200 German flies and midges (Insecta: Diptera) and its implications for metabarcoding-based biomonitoring.

Morinière J, Balke M, Doczkal D, Geiger MF, Hardulak LA, Haszprunar G, Hausmann A, Hendrich L, Regalado L, Rulik B, Schmidt S, Wägele JW, Hebert PDN.

Mol Ecol Resour. 2019 Apr 12. doi: 10.1111/1755-0998.13022. [Epub ahead of print]

PMID:
30977972
15.

Is qualitative and quantitative metabarcoding of dung fauna biodiversity feasible?

Blanckenhorn WU, Rohner PT, Bernasconi MV, Haugstetter J, Buser A.

Environ Toxicol Chem. 2016 Aug;35(8):1970-7. doi: 10.1002/etc.3275. Epub 2016 Feb 3.

PMID:
26450644
16.

Environmental barcoding: a next-generation sequencing approach for biomonitoring applications using river benthos.

Hajibabaei M, Shokralla S, Zhou X, Singer GA, Baird DJ.

PLoS One. 2011 Apr 13;6(4):e17497. doi: 10.1371/journal.pone.0017497.

17.

DNA barcoding of economically important freshwater fish species from north-central Nigeria uncovers cryptic diversity.

Iyiola OA, Nneji LM, Mustapha MK, Nzeh CG, Oladipo SO, Nneji IC, Okeyoyin AO, Nwani CD, Ugwumba OA, Ugwumba AAA, Faturoti EO, Wang YY, Chen J, Wang WZ, Adeola AC.

Ecol Evol. 2018 Jun 13;8(14):6932-6951. doi: 10.1002/ece3.4210. eCollection 2018 Jul.

18.

Sorting specimen-rich invertebrate samples with cost-effective NGS barcodes: Validating a reverse workflow for specimen processing.

Wang WY, Srivathsan A, Foo M, Yamane SK, Meier R.

Mol Ecol Resour. 2018 May;18(3):490-501. doi: 10.1111/1755-0998.12751. Epub 2018 Feb 2.

PMID:
29314756
19.

Exploring the Leaf Beetle Fauna (Coleoptera: Chrysomelidae) of an Ecuadorian Mountain Forest Using DNA Barcoding.

Thormann B, Ahrens D, Marín Armijos D, Peters MK, Wagner T, Wägele JW.

PLoS One. 2016 Feb 5;11(2):e0148268. doi: 10.1371/journal.pone.0148268. eCollection 2016.

20.

Spatial heterogeneity in the Mediterranean Biodiversity Hotspot affects barcoding accuracy of its freshwater fishes.

Geiger MF, Herder F, Monaghan MT, Almada V, Barbieri R, Bariche M, Berrebi P, Bohlen J, Casal-Lopez M, Delmastro GB, Denys GP, Dettai A, Doadrio I, Kalogianni E, Kärst H, Kottelat M, Kovačić M, Laporte M, Lorenzoni M, Marčić Z, Özuluğ M, Perdices A, Perea S, Persat H, Porcelotti S, Puzzi C, Robalo J, Šanda R, Schneider M, Šlechtová V, Stoumboudi M, Walter S, Freyhof J.

Mol Ecol Resour. 2014 Nov;14(6):1210-21. doi: 10.1111/1755-0998.12257. Epub 2014 Apr 15.

PMID:
24690331

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