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Items: 1 to 20 of 105

1.

African evolutionary history inferred from whole genome sequence data of 44 indigenous African populations.

Fan S, Kelly DE, Beltrame MH, Hansen MEB, Mallick S, Ranciaro A, Hirbo J, Thompson S, Beggs W, Nyambo T, Omar SA, Meskel DW, Belay G, Froment A, Patterson N, Reich D, Tishkoff SA.

Genome Biol. 2019 Apr 26;20(1):82. doi: 10.1186/s13059-019-1679-2.

2.

African genetic diversity provides novel insights into evolutionary history and local adaptations.

Choudhury A, Aron S, Sengupta D, Hazelhurst S, Ramsay M.

Hum Mol Genet. 2018 Aug 1;27(R2):R209-R218. doi: 10.1093/hmg/ddy161. Review.

PMID:
29741686
3.

Hunter-gatherer genomic diversity suggests a southern African origin for modern humans.

Henn BM, Gignoux CR, Jobin M, Granka JM, Macpherson JM, Kidd JM, Rodríguez-Botigué L, Ramachandran S, Hon L, Brisbin A, Lin AA, Underhill PA, Comas D, Kidd KK, Norman PJ, Parham P, Bustamante CD, Mountain JL, Feldman MW.

Proc Natl Acad Sci U S A. 2011 Mar 29;108(13):5154-62. doi: 10.1073/pnas.1017511108. Epub 2011 Mar 7.

4.

Genomic evidence for shared common ancestry of East African hunting-gathering populations and insights into local adaptation.

Scheinfeldt LB, Soi S, Lambert C, Ko WY, Coulibaly A, Ranciaro A, Thompson S, Hirbo J, Beggs W, Ibrahim M, Nyambo T, Omar S, Woldemeskel D, Belay G, Froment A, Kim J, Tishkoff SA.

Proc Natl Acad Sci U S A. 2019 Feb 19. pii: 201817678. doi: 10.1073/pnas.1817678116. [Epub ahead of print]

PMID:
30782801
5.

Revised timeline and distribution of the earliest diverged human maternal lineages in southern Africa.

Chan EK, Hardie RA, Petersen DC, Beeson K, Bornman RM, Smith AB, Hayes VM.

PLoS One. 2015 Mar 25;10(3):e0121223. doi: 10.1371/journal.pone.0121223. eCollection 2015.

6.

Whole-genome sequence analyses of Western Central African Pygmy hunter-gatherers reveal a complex demographic history and identify candidate genes under positive natural selection.

Hsieh P, Veeramah KR, Lachance J, Tishkoff SA, Wall JD, Hammer MF, Gutenkunst RN.

Genome Res. 2016 Mar;26(3):279-90. doi: 10.1101/gr.192971.115. Epub 2016 Feb 17.

7.

Evolutionary history and adaptation from high-coverage whole-genome sequences of diverse African hunter-gatherers.

Lachance J, Vernot B, Elbers CC, Ferwerda B, Froment A, Bodo JM, Lema G, Fu W, Nyambo TB, Rebbeck TR, Zhang K, Akey JM, Tishkoff SA.

Cell. 2012 Aug 3;150(3):457-69. doi: 10.1016/j.cell.2012.07.009. Epub 2012 Jul 26.

8.

A genomic portrait of haplotype diversity and signatures of selection in indigenous southern African populations.

Chimusa ER, Meintjies A, Tchanga M, Mulder N, Seoighe C, Soodyall H, Ramesar R.

PLoS Genet. 2015 Mar 26;11(3):e1005052. doi: 10.1371/journal.pgen.1005052. eCollection 2015 Mar. Erratum in: PLoS Genet. 2015 Jul;11(7):e1005363. Seioghe, Cathal [corrected to Seoighe, Cathal].

9.

Genetic Ancestry of Hadza and Sandawe Peoples Reveals Ancient Population Structure in Africa.

Shriner D, Tekola-Ayele F, Adeyemo A, Rotimi CN.

Genome Biol Evol. 2018 Mar 1;10(3):875-882. doi: 10.1093/gbe/evy051.

10.

Population genetic analysis of the DARC locus (Duffy) reveals adaptation from standing variation associated with malaria resistance in humans.

McManus KF, Taravella AM, Henn BM, Bustamante CD, Sikora M, Cornejo OE.

PLoS Genet. 2017 Mar 10;13(3):e1006560. doi: 10.1371/journal.pgen.1006560. eCollection 2017 Mar.

11.

The genetic structure and history of Africans and African Americans.

Tishkoff SA, Reed FA, Friedlaender FR, Ehret C, Ranciaro A, Froment A, Hirbo JB, Awomoyi AA, Bodo JM, Doumbo O, Ibrahim M, Juma AT, Kotze MJ, Lema G, Moore JH, Mortensen H, Nyambo TB, Omar SA, Powell K, Pretorius GS, Smith MW, Thera MA, Wambebe C, Weber JL, Williams SM.

Science. 2009 May 22;324(5930):1035-44. doi: 10.1126/science.1172257. Epub 2009 Apr 30.

12.

Carriers of mitochondrial DNA macrohaplogroup L3 basal lineages migrated back to Africa from Asia around 70,000 years ago.

Cabrera VM, Marrero P, Abu-Amero KK, Larruga JM.

BMC Evol Biol. 2018 Jun 19;18(1):98. doi: 10.1186/s12862-018-1211-4.

13.

Genomic variation in seven Khoe-San groups reveals adaptation and complex African history.

Schlebusch CM, Skoglund P, Sjödin P, Gattepaille LM, Hernandez D, Jay F, Li S, De Jongh M, Singleton A, Blum MG, Soodyall H, Jakobsson M.

Science. 2012 Oct 19;338(6105):374-9. doi: 10.1126/science.1227721. Epub 2012 Sep 20.

14.

African human mtDNA phylogeography at-a-glance.

Rosa A, Brehem A.

J Anthropol Sci. 2011;89:25-58. doi: 10.4436/jass.89006. Epub 2011 Mar 15. Review.

15.

Whole-genome sequence analysis of a Pan African set of samples reveals archaic gene flow from an extinct basal population of modern humans into sub-Saharan populations.

Lorente-Galdos B, Lao O, Serra-Vidal G, Santpere G, Kuderna LFK, Arauna LR, Fadhlaoui-Zid K, Pimenoff VN, Soodyall H, Zalloua P, Marques-Bonet T, Comas D.

Genome Biol. 2019 Apr 26;20(1):77. doi: 10.1186/s13059-019-1684-5.

16.

Reconstructing Prehistoric African Population Structure.

Skoglund P, Thompson JC, Prendergast ME, Mittnik A, Sirak K, Hajdinjak M, Salie T, Rohland N, Mallick S, Peltzer A, Heinze A, Olalde I, Ferry M, Harney E, Michel M, Stewardson K, Cerezo-Román JI, Chiumia C, Crowther A, Gomani-Chindebvu E, Gidna AO, Grillo KM, Helenius IT, Hellenthal G, Helm R, Horton M, López S, Mabulla AZP, Parkington J, Shipton C, Thomas MG, Tibesasa R, Welling M, Hayes VM, Kennett DJ, Ramesar R, Meyer M, Pääbo S, Patterson N, Morris AG, Boivin N, Pinhasi R, Krause J, Reich D.

Cell. 2017 Sep 21;171(1):59-71.e21. doi: 10.1016/j.cell.2017.08.049.

17.

Modeling Human Population Separation History Using Physically Phased Genomes.

Song S, Sliwerska E, Emery S, Kidd JM.

Genetics. 2017 Jan;205(1):385-395. doi: 10.1534/genetics.116.192963. Epub 2016 Nov 9.

18.

Recent acquisition of Helicobacter pylori by Baka pygmies.

Nell S, Eibach D, Montano V, Maady A, Nkwescheu A, Siri J, Elamin WF, Falush D, Linz B, Achtman M, Moodley Y, Suerbaum S.

PLoS Genet. 2013;9(9):e1003775. doi: 10.1371/journal.pgen.1003775. Epub 2013 Sep 19.

19.

Genome-wide patterns of population structure and admixture in West Africans and African Americans.

Bryc K, Auton A, Nelson MR, Oksenberg JR, Hauser SL, Williams S, Froment A, Bodo JM, Wambebe C, Tishkoff SA, Bustamante CD.

Proc Natl Acad Sci U S A. 2010 Jan 12;107(2):786-91. doi: 10.1073/pnas.0909559107. Epub 2009 Dec 22.

20.

The genetics of East African populations: a Nilo-Saharan component in the African genetic landscape.

Dobon B, Hassan HY, Laayouni H, Luisi P, Ricaño-Ponce I, Zhernakova A, Wijmenga C, Tahir H, Comas D, Netea MG, Bertranpetit J.

Sci Rep. 2015 May 28;5:9996. doi: 10.1038/srep09996.

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