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Items: 1 to 20 of 102

1.

The Genome of C57BL/6J "Eve", the Mother of the Laboratory Mouse Genome Reference Strain.

Sarsani VK, Raghupathy N, Fiddes IT, Armstrong J, Thibaud-Nissen F, Zinder O, Bolisetty M, Howe K, Hinerfeld D, Ruan X, Rowe L, Barter M, Ananda G, Paten B, Weinstock GM, Churchill GA, Wiles MV, Schneider VA, Srivastava A, Reinholdt LG.

G3 (Bethesda). 2019 Jun 5;9(6):1795-1805. doi: 10.1534/g3.119.400071.

3.

Behavioral characterization of wild derived male mice (Mus musculus musculus) of the PWD/Ph inbred strain: high exploration compared to C57BL/6J.

Fernandes C, Liu L, Paya-Cano JL, Gregorová S, Forejt J, Schalkwyk LC.

Behav Genet. 2004 Nov;34(6):621-30.

PMID:
15520518
4.

A comparative phenotypic and genomic analysis of C57BL/6J and C57BL/6N mouse strains.

Simon MM, Greenaway S, White JK, Fuchs H, Gailus-Durner V, Wells S, Sorg T, Wong K, Bedu E, Cartwright EJ, Dacquin R, Djebali S, Estabel J, Graw J, Ingham NJ, Jackson IJ, Lengeling A, Mandillo S, Marvel J, Meziane H, Preitner F, Puk O, Roux M, Adams DJ, Atkins S, Ayadi A, Becker L, Blake A, Brooker D, Cater H, Champy MF, Combe R, Danecek P, di Fenza A, Gates H, Gerdin AK, Golini E, Hancock JM, Hans W, Hölter SM, Hough T, Jurdic P, Keane TM, Morgan H, Müller W, Neff F, Nicholson G, Pasche B, Roberson LA, Rozman J, Sanderson M, Santos L, Selloum M, Shannon C, Southwell A, Tocchini-Valentini GP, Vancollie VE, Westerberg H, Wurst W, Zi M, Yalcin B, Ramirez-Solis R, Steel KP, Mallon AM, de Angelis MH, Herault Y, Brown SD.

Genome Biol. 2013 Jul 31;14(7):R82. doi: 10.1186/gb-2013-14-7-r82.

5.

Genomic copy number and expression variation within the C57BL/6J inbred mouse strain.

Watkins-Chow DE, Pavan WJ.

Genome Res. 2008 Jan;18(1):60-6. Epub 2007 Nov 21.

6.

Contribution of Asian mouse subspecies Mus musculus molossinus to genomic constitution of strain C57BL/6J, as defined by BAC-end sequence-SNP analysis.

Abe K, Noguchi H, Tagawa K, Yuzuriha M, Toyoda A, Kojima T, Ezawa K, Saitou N, Hattori M, Sakaki Y, Moriwaki K, Shiroishi T.

Genome Res. 2004 Dec;14(12):2439-47.

7.

Overview of inactivating mutations in the protein-coding genome of the mouse reference strain C57BL/6J.

Timmermans S, Libert C.

JCI Insight. 2018 Jul 12;3(13). pii: 121758. doi: 10.1172/jci.insight.121758.

8.

Chromosome 1 Sequence Analysis of C57BL/6J-Chr1KM Mouse Strain.

Xu F, Chao T, Zhang Y, Hu S, Zhou Y, Xu H, Xiao J, Li K.

Int J Genomics. 2017;2017:1712530. doi: 10.1155/2017/1712530. Epub 2017 Apr 9.

9.

The ancestor of extant Japanese fancy mice contributed to the mosaic genomes of classical inbred strains.

Takada T, Ebata T, Noguchi H, Keane TM, Adams DJ, Narita T, Shin-I T, Fujisawa H, Toyoda A, Abe K, Obata Y, Sakaki Y, Moriwaki K, Fujiyama A, Kohara Y, Shiroishi T.

Genome Res. 2013 Aug;23(8):1329-38. doi: 10.1101/gr.156497.113. Epub 2013 Apr 19.

11.

Lineage-specific biology revealed by a finished genome assembly of the mouse.

Church DM, Goodstadt L, Hillier LW, Zody MC, Goldstein S, She X, Bult CJ, Agarwala R, Cherry JL, DiCuccio M, Hlavina W, Kapustin Y, Meric P, Maglott D, Birtle Z, Marques AC, Graves T, Zhou S, Teague B, Potamousis K, Churas C, Place M, Herschleb J, Runnheim R, Forrest D, Amos-Landgraf J, Schwartz DC, Cheng Z, Lindblad-Toh K, Eichler EE, Ponting CP; Mouse Genome Sequencing Consortium.

PLoS Biol. 2009 May 5;7(5):e1000112. doi: 10.1371/journal.pbio.1000112. Epub 2009 May 26.

12.

Mus spretus LINE-1 sequences detected in the Mus musculus inbred strain C57BL/6J using LINE-1 DNA probes.

Rikke BA, Zhao Y, Daggett LP, Reyes R, Hardies SC.

Genetics. 1995 Feb;139(2):901-6.

13.

Manual annotation and analysis of the defensin gene cluster in the C57BL/6J mouse reference genome.

Amid C, Rehaume LM, Brown KL, Gilbert JG, Dougan G, Hancock RE, Harrow JL.

BMC Genomics. 2009 Dec 15;10:606. doi: 10.1186/1471-2164-10-606.

14.

Genomic landscapes of endogenous retroviruses unveil intricate genetics of conventional and genetically-engineered laboratory mouse strains.

Lee KH, Lim D, Chiu S, Greenhalgh D, Cho K.

Exp Mol Pathol. 2016 Apr;100(2):248-56. doi: 10.1016/j.yexmp.2016.01.005. Epub 2016 Jan 11.

15.

Next-generation sequencing of experimental mouse strains.

Yalcin B, Adams DJ, Flint J, Keane TM.

Mamm Genome. 2012 Oct;23(9-10):490-8. doi: 10.1007/s00335-012-9402-6. Epub 2012 Jul 7. Review.

16.

Evolution of major milk proteins in Mus musculus and Mus spretus mouse species: a genoproteomic analysis.

Boumahrou N, Bevilacqua C, Beauvallet C, Miranda G, Andrei S, Rebours E, Panthier JJ, Bellier S, Martin P.

BMC Genomics. 2011 Jan 28;12:80. doi: 10.1186/1471-2164-12-80.

17.

Unexpected effects of different genetic backgrounds on identification of genomic rearrangements via whole-genome next generation sequencing.

Chen Z, Gowan K, Leach SM, Viboolsittiseri SS, Mishra AK, Kadoishi T, Diener K, Gao B, Jones K, Wang JH.

BMC Genomics. 2016 Oct 21;17(1):823.

18.

Genome Sequencing of Chromosome 1 Substitution Lines Derived from Chinese Wild Mice Revealed a Unique Resource for Genetic Studies of Complex Traits.

Xu F, Chao T, Liang Y, Li K, Hu S, Wang M, Zhou Y, Xu H, Xiao J.

G3 (Bethesda). 2016 Nov 8;6(11):3571-3580. doi: 10.1534/g3.116.033902.

19.

Rapid Low-Cost Assembly of the Drosophila melanogaster Reference Genome Using Low-Coverage, Long-Read Sequencing.

Solares EA, Chakraborty M, Miller DE, Kalsow S, Hall K, Perera AG, Emerson JJ, Hawley RS.

G3 (Bethesda). 2018 Oct 3;8(10):3143-3154. doi: 10.1534/g3.118.200162.

20.

Disruption of genetic interaction between two autosomal regions and the X chromosome causes reproductive isolation between mouse strains derived from different subspecies.

Oka A, Aoto T, Totsuka Y, Takahashi R, Ueda M, Mita A, Sakurai-Yamatani N, Yamamoto H, Kuriki S, Takagi N, Moriwaki K, Shiroishi T.

Genetics. 2007 Jan;175(1):185-97. Epub 2006 Oct 22.

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