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Items: 1 to 20 of 99

1.

Functional genomics of the rapidly replicating bacterium Vibrio natriegens by CRISPRi.

Lee HH, Ostrov N, Wong BG, Gold MA, Khalil AS, Church GM.

Nat Microbiol. 2019 Jul;4(7):1105-1113. doi: 10.1038/s41564-019-0423-8. Epub 2019 Apr 8.

PMID:
30962569
2.

Metabolism of the fast-growing bacterium Vibrio natriegens elucidated by 13C metabolic flux analysis.

Long CP, Gonzalez JE, Cipolla RM, Antoniewicz MR.

Metab Eng. 2017 Nov;44:191-197. doi: 10.1016/j.ymben.2017.10.008. Epub 2017 Oct 16.

3.

Generation of a prophage-free variant of the fast-growing bacterium Vibrio natriegens.

Pfeifer E, Michniewski S, Gätgens C, Münch E, Müller F, Polen T, Millard A, Blombach B, Frunzke J.

Appl Environ Microbiol. 2019 Jun 28. pii: AEM.00853-19. doi: 10.1128/AEM.00853-19. [Epub ahead of print]

4.

Establishing a Cell-Free Vibrio natriegens Expression System.

Wiegand DJ, Lee HH, Ostrov N, Church GM.

ACS Synth Biol. 2018 Oct 19;7(10):2475-2479. doi: 10.1021/acssynbio.8b00222. Epub 2018 Sep 12.

PMID:
30160938
5.

CRISPR interference-guided multiplex repression of endogenous competing pathway genes for redirecting metabolic flux in Escherichia coli.

Kim SK, Seong W, Han GH, Lee DH, Lee SG.

Microb Cell Fact. 2017 Nov 3;16(1):188. doi: 10.1186/s12934-017-0802-x.

6.

CRISPR interference-guided balancing of a biosynthetic mevalonate pathway increases terpenoid production.

Kim SK, Han GH, Seong W, Kim H, Kim SW, Lee DH, Lee SG.

Metab Eng. 2016 Nov;38:228-240. doi: 10.1016/j.ymben.2016.08.006. Epub 2016 Aug 26.

PMID:
27569599
7.

High Substrate Uptake Rates Empower Vibrio natriegens as Production Host for Industrial Biotechnology.

Hoffart E, Grenz S, Lange J, Nitschel R, Müller F, Schwentner A, Feith A, Lenfers-Lücker M, Takors R, Blombach B.

Appl Environ Microbiol. 2017 Oct 31;83(22). pii: e01614-17. doi: 10.1128/AEM.01614-17. Print 2017 Nov 15.

8.

Reversible Gene Expression Control in Yersinia pestis by Using an Optimized CRISPR Interference System.

Wang T, Wang M, Zhang Q, Cao S, Li X, Qi Z, Tan Y, You Y, Bi Y, Song Y, Yang R, Du Z.

Appl Environ Microbiol. 2019 May 30;85(12). pii: e00097-19. doi: 10.1128/AEM.00097-19. Print 2019 Jun 15.

PMID:
30979834
9.

Tuning Gene Activity by Inducible and Targeted Regulation of Gene Expression in Minimal Bacterial Cells.

Mariscal AM, Kakizawa S, Hsu JY, Tanaka K, González-González L, Broto A, Querol E, Lluch-Senar M, Piñero-Lambea C, Sun L, Weyman PD, Wise KS, Merryman C, Tse G, Moore AJ, Hutchison CA 3rd, Smith HO, Tomita M, Venter JC, Glass JI, Piñol J, Suzuki Y.

ACS Synth Biol. 2018 Jun 15;7(6):1538-1552. doi: 10.1021/acssynbio.8b00028. Epub 2018 May 22.

10.
11.

High-Throughput Approaches to Pinpoint Function within the Noncoding Genome.

Montalbano A, Canver MC, Sanjana NE.

Mol Cell. 2017 Oct 5;68(1):44-59. doi: 10.1016/j.molcel.2017.09.017. Review.

12.

Next-generation libraries for robust RNA interference-based genome-wide screens.

Kampmann M, Horlbeck MA, Chen Y, Tsai JC, Bassik MC, Gilbert LA, Villalta JE, Kwon SC, Chang H, Kim VN, Weissman JS.

Proc Natl Acad Sci U S A. 2015 Jun 30;112(26):E3384-91. doi: 10.1073/pnas.1508821112. Epub 2015 Jun 15.

13.

Applications of CRISPR/Cas System to Bacterial Metabolic Engineering.

Cho S, Shin J, Cho BK.

Int J Mol Sci. 2018 Apr 5;19(4). pii: E1089. doi: 10.3390/ijms19041089. Review.

14.

Vibrio natriegens as a fast-growing host for molecular biology.

Weinstock MT, Hesek ED, Wilson CM, Gibson DG.

Nat Methods. 2016 Oct;13(10):849-51. doi: 10.1038/nmeth.3970. Epub 2016 Aug 29.

PMID:
27571549
15.

CRISPR Interference for Rapid Knockdown of Essential Cell Cycle Genes in Lactobacillus plantarum.

Myrbråten IS, Wiull K, Salehian Z, Håvarstein LS, Straume D, Mathiesen G, Kjos M.

mSphere. 2019 Mar 20;4(2). pii: e00007-19. doi: 10.1128/mSphere.00007-19.

16.

CRISPRi engineering E. coli for morphology diversification.

Elhadi D, Lv L, Jiang XR, Wu H, Chen GQ.

Metab Eng. 2016 Nov;38:358-369. doi: 10.1016/j.ymben.2016.09.001. Epub 2016 Sep 28.

PMID:
27693319
17.

High-throughput CRISPRi phenotyping identifies new essential genes in Streptococcus pneumoniae.

Liu X, Gallay C, Kjos M, Domenech A, Slager J, van Kessel SP, Knoops K, Sorg RA, Zhang JR, Veening JW.

Mol Syst Biol. 2017 May 10;13(5):931. doi: 10.15252/msb.20167449.

18.

The applications of CRISPR screen in functional genomics.

Qi X, Zhang J, Zhao Y, Chen T, Xiang Y, Hui J, Cai D, Liu Y, Xia L, Yu T, Li G.

Brief Funct Genomics. 2017 Jan;16(1):34-37. doi: 10.1093/bfgp/elw020. Epub 2016 Jun 20. Review.

PMID:
27329784
19.

CRISPR interference (CRISPRi) for sequence-specific control of gene expression.

Larson MH, Gilbert LA, Wang X, Lim WA, Weissman JS, Qi LS.

Nat Protoc. 2013 Nov;8(11):2180-96. doi: 10.1038/nprot.2013.132. Epub 2013 Oct 17.

20.

rRNA promoter activity in the fast-growing bacterium Vibrio natriegens.

Aiyar SE, Gaal T, Gourse RL.

J Bacteriol. 2002 Mar;184(5):1349-58.

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