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Items: 1 to 20 of 102

1.

Setting Up an Ancient DNA Laboratory.

Fulton TL, Shapiro B.

Methods Mol Biol. 2019;1963:1-13. doi: 10.1007/978-1-4939-9176-1_1.

PMID:
30875038
2.

Setting up an ancient DNA laboratory.

Fulton TL.

Methods Mol Biol. 2012;840:1-11. doi: 10.1007/978-1-61779-516-9_1.

PMID:
22237515
3.

Extensive human DNA contamination in extracts from ancient dog bones and teeth.

Malmström H, Storå J, Dalén L, Holmlund G, Götherström A.

Mol Biol Evol. 2005 Oct;22(10):2040-7. Epub 2005 Jun 15.

PMID:
15958782
4.

Improving ancient DNA read mapping against modern reference genomes.

Schubert M, Ginolhac A, Lindgreen S, Thompson JF, Al-Rasheid KA, Willerslev E, Krogh A, Orlando L.

BMC Genomics. 2012 May 10;13:178. doi: 10.1186/1471-2164-13-178.

5.

Ancient DNA analysis of human populations.

Kolman CJ, Tuross N.

Am J Phys Anthropol. 2000 Jan;111(1):5-23.

PMID:
10618586
6.

Monitoring DNA contamination in handled vs. directly excavated ancient human skeletal remains.

Pilli E, Modi A, Serpico C, Achilli A, Lancioni H, Lippi B, Bertoldi F, Gelichi S, Lari M, Caramelli D.

PLoS One. 2013;8(1):e52524. doi: 10.1371/journal.pone.0052524. Epub 2013 Jan 25.

7.

Analysis of Whole Mitogenomes from Ancient Samples.

Fortes GG, Paijmans JL.

Methods Mol Biol. 2015;1347:179-95. doi: 10.1007/978-1-4939-2990-0_13.

PMID:
26374318
8.

Double-Stranded Library Preparation for Ancient and Other Degraded Samples.

Henneberger K, Barlow A, Paijmans JLA.

Methods Mol Biol. 2019;1963:65-73. doi: 10.1007/978-1-4939-9176-1_8.

PMID:
30875045
9.

Ancient plant DNA in lake sediments.

Parducci L, Bennett KD, Ficetola GF, Alsos IG, Suyama Y, Wood JR, Pedersen MW.

New Phytol. 2017 May;214(3):924-942. doi: 10.1111/nph.14470. Epub 2017 Apr 3. Review.

10.

Pulling out the 1%: whole-genome capture for the targeted enrichment of ancient DNA sequencing libraries.

Carpenter ML, Buenrostro JD, Valdiosera C, Schroeder H, Allentoft ME, Sikora M, Rasmussen M, Gravel S, Guillén S, Nekhrizov G, Leshtakov K, Dimitrova D, Theodossiev N, Pettener D, Luiselli D, Sandoval K, Moreno-Estrada A, Li Y, Wang J, Gilbert MT, Willerslev E, Greenleaf WJ, Bustamante CD.

Am J Hum Genet. 2013 Nov 7;93(5):852-64. doi: 10.1016/j.ajhg.2013.10.002. Epub 2013 Oct 25.

11.

Reconstructing ancient genomes and epigenomes.

Orlando L, Gilbert MT, Willerslev E.

Nat Rev Genet. 2015 Jul;16(7):395-408. doi: 10.1038/nrg3935. Epub 2015 Jun 9. Review.

PMID:
26055157
12.

Setting the stage - building and working in an ancient DNA laboratory.

Knapp M, Clarke AC, Horsburgh KA, Matisoo-Smith EA.

Ann Anat. 2012 Jan 20;194(1):3-6. doi: 10.1016/j.aanat.2011.03.008. Epub 2011 Mar 31. Review.

PMID:
21514120
13.

Analysis of high-throughput ancient DNA sequencing data.

Kircher M.

Methods Mol Biol. 2012;840:197-228. doi: 10.1007/978-1-61779-516-9_23.

PMID:
22237537
14.

Ancient genomics.

Der Sarkissian C, Allentoft ME, Ávila-Arcos MC, Barnett R, Campos PF, Cappellini E, Ermini L, Fernández R, da Fonseca R, Ginolhac A, Hansen AJ, Jónsson H, Korneliussen T, Margaryan A, Martin MD, Moreno-Mayar JV, Raghavan M, Rasmussen M, Velasco MS, Schroeder H, Schubert M, Seguin-Orlando A, Wales N, Gilbert MT, Willerslev E, Orlando L.

Philos Trans R Soc Lond B Biol Sci. 2015 Jan 19;370(1660):20130387. doi: 10.1098/rstb.2013.0387. Review.

15.
16.

Characterizing DNA preservation in degraded specimens of Amara alpina (Carabidae: Coleoptera).

Heintzman PD, Elias SA, Moore K, Paszkiewicz K, Barnes I.

Mol Ecol Resour. 2014 May;14(3):606-15. doi: 10.1111/1755-0998.12205. Epub 2013 Dec 30.

PMID:
24266987
17.

Methods for the study of ancient DNA.

Keyser-Tracqui C, Ludes B.

Methods Mol Biol. 2005;297:253-64.

PMID:
15570113
18.

Toward high-resolution population genomics using archaeological samples.

Morozova I, Flegontov P, Mikheyev AS, Bruskin S, Asgharian H, Ponomarenko P, Klyuchnikov V, ArunKumar G, Prokhortchouk E, Gankin Y, Rogaev E, Nikolsky Y, Baranova A, Elhaik E, Tatarinova TV.

DNA Res. 2016 Aug;23(4):295-310. doi: 10.1093/dnares/dsw029. Epub 2016 Jul 19. Review.

19.

Damage and repair of ancient DNA.

Mitchell D, Willerslev E, Hansen A.

Mutat Res. 2005 Apr 1;571(1-2):265-76. Review.

PMID:
15748652
20.

Sequencing Library Preparation from Degraded Samples for Non-illumina Sequencing Platforms.

Martins RF, Kampmann ML, Förster DW.

Methods Mol Biol. 2019;1963:85-92. doi: 10.1007/978-1-4939-9176-1_10.

PMID:
30875047

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