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Items: 1 to 20 of 111

1.

Origin and evolution of the octoploid strawberry genome.

Edger PP, Poorten TJ, VanBuren R, Hardigan MA, Colle M, McKain MR, Smith RD, Teresi SJ, Nelson ADL, Wai CM, Alger EI, Bird KA, Yocca AE, Pumplin N, Ou S, Ben-Zvi G, Brodt A, Baruch K, Swale T, Shiue L, Acharya CB, Cole GS, Mower JP, Childs KL, Jiang N, Lyons E, Freeling M, Puzey JR, Knapp SJ.

Nat Genet. 2019 Mar;51(3):541-547. doi: 10.1038/s41588-019-0356-4. Epub 2019 Feb 25. Erratum in: Nat Genet. 2019 Apr;51(4):765.

PMID:
30804557
2.

Comparative genetic mapping between octoploid and diploid Fragaria species reveals a high level of colinearity between their genomes and the essentially disomic behavior of the cultivated octoploid strawberry.

Rousseau-Gueutin M, Lerceteau-Köhler E, Barrot L, Sargent DJ, Monfort A, Simpson D, Arús P, Guérin G, Denoyes-Rothan B.

Genetics. 2008 Aug;179(4):2045-60. doi: 10.1534/genetics.107.083840. Epub 2008 Jul 27.

3.

HaploSNP affinities and linkage map positions illuminate subgenome composition in the octoploid, cultivated strawberry (Fragaria×ananassa).

Sargent DJ, Yang Y, Šurbanovski N, Bianco L, Buti M, Velasco R, Giongo L, Davis TM.

Plant Sci. 2016 Jan;242:140-150. doi: 10.1016/j.plantsci.2015.07.004. Epub 2015 Jul 10.

PMID:
26566832
4.
5.

Discrimination of candidate subgenome-specific loci by linkage map construction with an S1 population of octoploid strawberry (Fragaria × ananassa).

Nagano S, Shirasawa K, Hirakawa H, Maeda F, Ishikawa M, Isobe SN.

BMC Genomics. 2017 May 12;18(1):374. doi: 10.1186/s12864-017-3762-y.

6.

Evolutionary origins and dynamics of octoploid strawberry subgenomes revealed by dense targeted capture linkage maps.

Tennessen JA, Govindarajulu R, Ashman TL, Liston A.

Genome Biol Evol. 2014 Dec 4;6(12):3295-313. doi: 10.1093/gbe/evu261.

7.

Development and preliminary evaluation of a 90 K Axiom® SNP array for the allo-octoploid cultivated strawberry Fragaria × ananassa.

Bassil NV, Davis TM, Zhang H, Ficklin S, Mittmann M, Webster T, Mahoney L, Wood D, Alperin ES, Rosyara UR, Koehorst-Vanc Putten H, Monfort A, Sargent DJ, Amaya I, Denoyes B, Bianco L, van Dijk T, Pirani A, Iezzoni A, Main D, Peace C, Yang Y, Whitaker V, Verma S, Bellon L, Brew F, Herrera R, van de Weg E.

BMC Genomics. 2015 Mar 7;16:155. doi: 10.1186/s12864-015-1310-1.

8.

Dissection of the octoploid strawberry genome by deep sequencing of the genomes of Fragaria species.

Hirakawa H, Shirasawa K, Kosugi S, Tashiro K, Nakayama S, Yamada M, Kohara M, Watanabe A, Kishida Y, Fujishiro T, Tsuruoka H, Minami C, Sasamoto S, Kato M, Nanri K, Komaki A, Yanagi T, Guoxin Q, Maeda F, Ishikawa M, Kuhara S, Sato S, Tabata S, Isobe SN.

DNA Res. 2014;21(2):169-81. doi: 10.1093/dnares/dst049. Epub 2013 Nov 26.

9.

A microsatellite linkage map for the cultivated strawberry (Fragaria × ananassa) suggests extensive regions of homozygosity in the genome that may have resulted from breeding and selection.

Sargent DJ, Passey T, Surbanovski N, Lopez Girona E, Kuchta P, Davik J, Harrison R, Passey A, Whitehouse AB, Simpson DW.

Theor Appl Genet. 2012 May;124(7):1229-40. doi: 10.1007/s00122-011-1782-6. Epub 2012 Jan 5.

PMID:
22218676
10.

Diversity Arrays Technology (DArT) Marker Platforms for Diversity Analysis and Linkage Mapping in a Complex Crop, the Octoploid Cultivated Strawberry (Fragaria × ananassa).

Sánchez-Sevilla JF, Horvath A, Botella MA, Gaston A, Folta K, Kilian A, Denoyes B, Amaya I.

PLoS One. 2015 Dec 16;10(12):e0144960. doi: 10.1371/journal.pone.0144960. eCollection 2015.

11.

Insight into octoploid strawberry (Fragaria) subgenome composition revealed by GISH analysis of pentaploid hybrids.

Liu B, Poulsen EG, Davis TM.

Genome. 2016 Feb;59(2):79-86. doi: 10.1139/gen-2015-0116. Epub 2016 Feb 2.

PMID:
26835888
12.

Narrowing down the single homoeologous FaPFRU locus controlling flowering in cultivated octoploid strawberry using a selective mapping strategy.

Perrotte J, Gaston A, Potier A, Petit A, Rothan C, Denoyes B.

Plant Biotechnol J. 2016 Nov;14(11):2176-2189. doi: 10.1111/pbi.12574. Epub 2016 Jun 9.

13.

Comparison of nuclear, plastid, and mitochondrial phylogenies and the origin of wild octoploid strawberry species.

Govindarajulu R, Parks M, Tennessen JA, Liston A, Ashman TL.

Am J Bot. 2015 Apr;102(4):544-54. doi: 10.3732/ajb.1500026. Epub 2015 Mar 23.

14.

Insights into phylogeny, sex function and age of Fragaria based on whole chloroplast genome sequencing.

Njuguna W, Liston A, Cronn R, Ashman TL, Bassil N.

Mol Phylogenet Evol. 2013 Jan;66(1):17-29. doi: 10.1016/j.ympev.2012.08.026. Epub 2012 Sep 14.

PMID:
22982444
15.

Tracking the evolutionary history of polyploidy in Fragaria L. (strawberry): new insights from phylogenetic analyses of low-copy nuclear genes.

Rousseau-Gueutin M, Gaston A, Aïnouche A, Aïnouche ML, Olbricht K, Staudt G, Richard L, Denoyes-Rothan B.

Mol Phylogenet Evol. 2009 Jun;51(3):515-30. doi: 10.1016/j.ympev.2008.12.024. Epub 2009 Jan 4.

PMID:
19166953
16.

A near-isogenic line (NIL) collection in diploid strawberry and its use in the genetic analysis of morphologic, phenotypic and nutritional characters.

Urrutia M, Bonet J, Arús P, Monfort A.

Theor Appl Genet. 2015 Jul;128(7):1261-75. doi: 10.1007/s00122-015-2503-3. Epub 2015 Apr 5.

PMID:
25841354
17.

Sequence analysis of cultivated strawberry (Fragaria × ananassa Duch.) using microdissected single somatic chromosomes.

Yanagi T, Shirasawa K, Terachi M, Isobe S.

Plant Methods. 2017 Oct 30;13:91. doi: 10.1186/s13007-017-0237-8. eCollection 2017.

18.

Genetic Mapping and Phylogenetic Analysis Reveal Intraspecific Variation in Sex Chromosomes of the Virginian Strawberry.

Wei N, Govindarajulu R, Tennessen JA, Liston A, Ashman TL.

J Hered. 2017 Oct 30;108(7):731-739. doi: 10.1093/jhered/esx077.

PMID:
29036451
19.

Present-day sympatry belies the evolutionary origin of a high-order polyploid.

Wei N, Tennessen JA, Liston A, Ashman TL.

New Phytol. 2017 Oct;216(1):279-290. doi: 10.1111/nph.14711. Epub 2017 Aug 3.

20.

High variability and disomic segregation of microsatellites in the octoploid Fragaria virginiana Mill. (Rosaceae).

Ashley MV, Wilk JA, Styan SM, Craft KJ, Jones KL, Feldheim KA, Lewers KS, Ashman TL.

Theor Appl Genet. 2003 Nov;107(7):1201-7. Epub 2003 Aug 8.

PMID:
12908097

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