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Items: 1 to 20 of 96

1.

Prospective Whole-Genome Sequencing in Tuberculosis Outbreak Investigation, France, 2017-2018.

Genestet C, Tatai C, Berland JL, Claude JB, Westeel E, Hodille E, Fredenucci I, Rasigade JP, Ponsoda M, Jacomo V, Vachée A, Gaudart A, Gaillard JL, Roux AL, Ader F, Tararbit K, Terpant G, Bryant JE, Lina G, Dumitrescu O; Lyon TB Study Group.

Emerg Infect Dis. 2019 Mar;25(3):589-592. doi: 10.3201/eid2503.181124.

2.

Evolution of Extensively Drug-Resistant Tuberculosis over Four Decades: Whole Genome Sequencing and Dating Analysis of Mycobacterium tuberculosis Isolates from KwaZulu-Natal.

Cohen KA, Abeel T, Manson McGuire A, Desjardins CA, Munsamy V, Shea TP, Walker BJ, Bantubani N, Almeida DV, Alvarado L, Chapman SB, Mvelase NR, Duffy EY, Fitzgerald MG, Govender P, Gujja S, Hamilton S, Howarth C, Larimer JD, Maharaj K, Pearson MD, Priest ME, Zeng Q, Padayatchi N, Grosset J, Young SK, Wortman J, Mlisana KP, O'Donnell MR, Birren BW, Bishai WR, Pym AS, Earl AM.

PLoS Med. 2015 Sep 29;12(9):e1001880. doi: 10.1371/journal.pmed.1001880. eCollection 2015 Sep.

3.

Whole genome sequencing versus traditional genotyping for investigation of a Mycobacterium tuberculosis outbreak: a longitudinal molecular epidemiological study.

Roetzer A, Diel R, Kohl TA, Rückert C, Nübel U, Blom J, Wirth T, Jaenicke S, Schuback S, Rüsch-Gerdes S, Supply P, Kalinowski J, Niemann S.

PLoS Med. 2013;10(2):e1001387. doi: 10.1371/journal.pmed.1001387. Epub 2013 Feb 12.

4.

Use of whole genome sequencing to determine the microevolution of Mycobacterium tuberculosis during an outbreak.

Kato-Maeda M, Ho C, Passarelli B, Banaei N, Grinsdale J, Flores L, Anderson J, Murray M, Rose G, Kawamura LM, Pourmand N, Tariq MA, Gagneux S, Hopewell PC.

PLoS One. 2013;8(3):e58235. doi: 10.1371/journal.pone.0058235. Epub 2013 Mar 5.

5.

Tuberculosis Outbreak in an Educational Institution in Norway.

Norheim G, Seterelv S, Arnesen TM, Mengshoel AT, Tønjum T, Rønning JO, Eldholm V.

J Clin Microbiol. 2017 May;55(5):1327-1333. doi: 10.1128/JCM.01152-16. Epub 2017 Feb 15.

6.

Rapid, comprehensive, and affordable mycobacterial diagnosis with whole-genome sequencing: a prospective study.

Pankhurst LJ, Del Ojo Elias C, Votintseva AA, Walker TM, Cole K, Davies J, Fermont JM, Gascoyne-Binzi DM, Kohl TA, Kong C, Lemaitre N, Niemann S, Paul J, Rogers TR, Roycroft E, Smith EG, Supply P, Tang P, Wilcox MH, Wordsworth S, Wyllie D, Xu L, Crook DW; COMPASS-TB Study Group.

Lancet Respir Med. 2016 Jan;4(1):49-58. doi: 10.1016/S2213-2600(15)00466-X. Epub 2015 Dec 4.

7.

XDR-TB transmission in London: Case management and contact tracing investigation assisted by early whole genome sequencing.

Arnold A, Witney AA, Vergnano S, Roche A, Cosgrove CA, Houston A, Gould KA, Hinds J, Riley P, Macallan D, Butcher PD, Harrison TS.

J Infect. 2016 Sep;73(3):210-8. doi: 10.1016/j.jinf.2016.04.037. Epub 2016 Jun 14.

PMID:
27311749
8.

Whole genome sequence analysis of multidrug-resistant Mycobacterium tuberculosis Beijing isolates from an outbreak in Thailand.

Regmi SM, Chaiprasert A, Kulawonganunchai S, Tongsima S, Coker OO, Prammananan T, Viratyosin W, Thaipisuttikul I.

Mol Genet Genomics. 2015 Oct;290(5):1933-41. doi: 10.1007/s00438-015-1048-0. Epub 2015 Apr 24.

PMID:
25903079
9.

Cross-Border Movement of Highly Drug-Resistant Mycobacterium tuberculosis from Papua New Guinea to Australia through Torres Strait Protected Zone, 2010-2015.

Bainomugisa A, Pandey S, Donnan E, Simpson G, Foster J, Lavu E, Hiasihri S, McBryde ES, Moke R, Vincent S, Sintchenko V, Marais BJ, Coin LJM, Coulter C.

Emerg Infect Dis. 2019 Mar;25(3):406-415. doi: 10.3201/eid2503.181003.

10.

Whole Genome Sequencing of Mycobacterium tuberculosis Isolates From Extrapulmonary Sites.

Sharma K, Verma R, Advani J, Chatterjee O, Solanki HS, Sharma A, Varma S, Modi M, Ray P, Mukherjee KK, Sharma M, Dhillion MS, Suar M, Chatterjee A, Pandey A, Prasad TSK, Gowda H.

OMICS. 2017 Jul;21(7):413-425. doi: 10.1089/omi.2017.0070.

11.

Genotypic drug resistance using whole-genome sequencing of Mycobacterium tuberculosis clinical isolates from North-western Tanzania.

Kidenya BR, Mshana SE, Fitzgerald DW, Ocheretina O.

Tuberculosis (Edinb). 2018 Mar;109:97-101. doi: 10.1016/j.tube.2018.02.004. Epub 2018 Feb 21.

13.

Unmasking leading to a healthcare worker Mycobacterium tuberculosis transmission.

Holden KL, Bradley CW, Curran ET, Pollard C, Smith G, Holden E, Glynn P, Garvey MI.

J Hosp Infect. 2018 Dec;100(4):e226-e232. doi: 10.1016/j.jhin.2018.05.003. Epub 2018 May 9.

PMID:
29752996
14.

Mycobacterium tuberculosis Beijing outbreak in a school in Marseille, France, 2012.

Golesi F, Brignatz J, Bellenfant M, Raoult D, Drancourt M.

Euro Surveill. 2013 Jan 10;18(2). pii: 20354.

15.

Genomic sequencing is required for identification of tuberculosis transmission in Hawaii.

Koster KJ, Largen A, Foster JT, Drees KP, Qian L, Desmond E, Wan X, Hou S, Douglas JT.

BMC Infect Dis. 2018 Dec 3;18(1):608. doi: 10.1186/s12879-018-3502-1.

16.

[Application of whole genome sequencing technology in the epidemiology of tuberculosis].

Wu J, Tang LH, Yang CG, Yan HQ, Sun H, Shen X.

Zhonghua Liu Xing Bing Xue Za Zhi. 2016 Dec 10;37(12):1644-1646. doi: 10.3760/cma.j.issn.0254-6450.2016.12.017. Chinese.

PMID:
27998414
17.

Whole Genome Sequencing Demonstrates Limited Transmission within Identified Mycobacterium tuberculosis Clusters in New South Wales, Australia.

Gurjav U, Outhred AC, Jelfs P, McCallum N, Wang Q, Hill-Cawthorne GA, Marais BJ, Sintchenko V.

PLoS One. 2016 Oct 13;11(10):e0163612. doi: 10.1371/journal.pone.0163612. eCollection 2016.

18.

Contact investigations for outbreaks of Mycobacterium tuberculosis: advances through whole genome sequencing.

Walker TM, Monk P, Smith EG, Peto TE.

Clin Microbiol Infect. 2013 Sep;19(9):796-802. doi: 10.1111/1469-0691.12183. Epub 2013 Feb 21. Review.

19.

Identifying Likely Transmission Pathways within a 10-Year Community Outbreak of Tuberculosis by High-Depth Whole Genome Sequencing.

Outhred AC, Holmes N, Sadsad R, Martinez E, Jelfs P, Hill-Cawthorne GA, Gilbert GL, Marais BJ, Sintchenko V.

PLoS One. 2016 Mar 3;11(3):e0150550. doi: 10.1371/journal.pone.0150550. eCollection 2016.

20.

[Lessons learned from tuberculosis outbreak cases].

Kato S, Kuwabara K.

Kekkaku. 2014 Feb;89(2):77-88. Japanese.

PMID:
24716362

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