Similar articles for PMID: 30090105

Year	Number of Results
1997	1
1998	2
1999	2
2003	3
2004	1
2005	1
2008	1
2009	1
2010	1
2011	3
2012	5
2013	5
2014	5
2015	4
2016	3
2017	2
2018	15
2019	14
2020	16
2021	8
2022	10
2023	6
2024	1

1

Predicting Antigen Presentation-What Could We Learn From a Million Peptides?

Gfeller D, Bassani-Sternberg M. Gfeller D, et al. Front Immunol. 2018 Jul 25;9:1716. doi: 10.3389/fimmu.2018.01716. eCollection 2018. Front Immunol. 2018. PMID: 30090105 Free PMC article. Review.

2

Improved predictions of antigen presentation and TCR recognition with MixMHCpred2.2 and PRIME2.0 reveal potent SARS-CoV-2 CD8⁺ T-cell epitopes.

Gfeller D, Schmidt J, Croce G, Guillaume P, Bobisse S, Genolet R, Queiroz L, Cesbron J, Racle J, Harari A. Gfeller D, et al. Cell Syst. 2023 Jan 18;14(1):72-83.e5. doi: 10.1016/j.cels.2022.12.002. Epub 2023 Jan 4. Cell Syst. 2023. PMID: 36603583 Free PMC article.

3

Determination of a Predictive Cleavage Motif for Eluted Major Histocompatibility Complex Class II Ligands.

Paul S, Karosiene E, Dhanda SK, Jurtz V, Edwards L, Nielsen M, Sette A, Peters B. Paul S, et al. Front Immunol. 2018 Aug 6;9:1795. doi: 10.3389/fimmu.2018.01795. eCollection 2018. Front Immunol. 2018. PMID: 30127785 Free PMC article.

4

Contemplating immunopeptidomes to better predict them.

Gfeller D, Liu Y, Racle J. Gfeller D, et al. Semin Immunol. 2023 Mar;66:101708. doi: 10.1016/j.smim.2022.101708. Epub 2023 Jan 6. Semin Immunol. 2023. PMID: 36621290 Free article. Review.

5

Mass Spectrometry Based Immunopeptidomics Leads to Robust Predictions of Phosphorylated HLA Class I Ligands.

Solleder M, Guillaume P, Racle J, Michaux J, Pak HS, Müller M, Coukos G, Bassani-Sternberg M, Gfeller D. Solleder M, et al. Mol Cell Proteomics. 2020 Feb;19(2):390-404. doi: 10.1074/mcp.TIR119.001641. Epub 2019 Dec 17. Mol Cell Proteomics. 2020. PMID: 31848261 Free PMC article.

6

IEPAPI: a method for immune epitope prediction by incorporating antigen presentation and immunogenicity.

Deng J, Zhou X, Zhang P, Cheng W, Liu M, Tian J. Deng J, et al. Brief Bioinform. 2023 Jul 20;24(4):bbad171. doi: 10.1093/bib/bbad171. Brief Bioinform. 2023. PMID: 37232386

7

Analysis of Secondary Structure Biases in Naturally Presented HLA-I Ligands.

Perez MAS, Bassani-Sternberg M, Coukos G, Gfeller D, Zoete V. Perez MAS, et al. Front Immunol. 2019 Nov 22;10:2731. doi: 10.3389/fimmu.2019.02731. eCollection 2019. Front Immunol. 2019. PMID: 31824508 Free PMC article.

8

Elucidating the immunological effects of 5-azacytidine treatment in patients with myelodysplastic syndrome and identifying new conditional ligands and T-cell epitopes of relevance in melanoma.

Frøsig TM. Frøsig TM. Dan Med J. 2015 Aug;62(8):B5144. Dan Med J. 2015. PMID: 26239596 Free article.

9

A robust deep learning workflow to predict CD8 + T-cell epitopes.

Lee CH, Huh J, Buckley PR, Jang M, Pinho MP, Fernandes RA, Antanaviciute A, Simmons A, Koohy H. Lee CH, et al. Genome Med. 2023 Sep 13;15(1):70. doi: 10.1186/s13073-023-01225-z. Genome Med. 2023. PMID: 37705109 Free PMC article.

10

Direct interrogation of viral peptides presented by the class I HLA of HIV-infected T cells.

Yaciuk JC, Skaley M, Bardet W, Schafer F, Mojsilovic D, Cate S, Stewart CJ, McMurtrey C, Jackson KW, Buchli R, Olvera A, Cedeño S, Plana M, Mothe B, Brander C, West JT, Hildebrand WH. Yaciuk JC, et al. J Virol. 2014 Nov;88(22):12992-3004. doi: 10.1128/JVI.01914-14. Epub 2014 Aug 27. J Virol. 2014. PMID: 25165114 Free PMC article.

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