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Items: 1 to 20 of 86

1.

A Single-Cell Transcriptome Atlas of the Aging Drosophila Brain.

Davie K, Janssens J, Koldere D, De Waegeneer M, Pech U, Kreft Ł, Aibar S, Makhzami S, Christiaens V, Bravo González-Blas C, Poovathingal S, Hulselmans G, Spanier KI, Moerman T, Vanspauwen B, Geurs S, Voet T, Lammertyn J, Thienpont B, Liu S, Konstantinides N, Fiers M, Verstreken P, Aerts S.

Cell. 2018 Aug 9;174(4):982-998.e20. doi: 10.1016/j.cell.2018.05.057. Epub 2018 Jun 18.

2.

Brain transcriptome changes in the aging Drosophila melanogaster accompany olfactory memory performance deficits.

Pacifico R, MacMullen CM, Walkinshaw E, Zhang X, Davis RL.

PLoS One. 2018 Dec 21;13(12):e0209405. doi: 10.1371/journal.pone.0209405. eCollection 2018.

3.

SCENIC: single-cell regulatory network inference and clustering.

Aibar S, González-Blas CB, Moerman T, Huynh-Thu VA, Imrichova H, Hulselmans G, Rambow F, Marine JC, Geurts P, Aerts J, van den Oord J, Atak ZK, Wouters J, Aerts S.

Nat Methods. 2017 Nov;14(11):1083-1086. doi: 10.1038/nmeth.4463. Epub 2017 Oct 9.

4.

Molecular Diversity and Specializations among the Cells of the Adult Mouse Brain.

Saunders A, Macosko EZ, Wysoker A, Goldman M, Krienen FM, de Rivera H, Bien E, Baum M, Bortolin L, Wang S, Goeva A, Nemesh J, Kamitaki N, Brumbaugh S, Kulp D, McCarroll SA.

Cell. 2018 Aug 9;174(4):1015-1030.e16. doi: 10.1016/j.cell.2018.07.028.

PMID:
30096299
5.

Population and sex differences in Drosophila melanogaster brain gene expression.

Catalán A, Hutter S, Parsch J.

BMC Genomics. 2012 Nov 21;13:654. doi: 10.1186/1471-2164-13-654.

6.

Transcriptome profiling of aging Drosophila photoreceptors reveals gene expression trends that correlate with visual senescence.

Hall H, Medina P, Cooper DA, Escobedo SE, Rounds J, Brennan KJ, Vincent C, Miura P, Doerge R, Weake VM.

BMC Genomics. 2017 Nov 21;18(1):894. doi: 10.1186/s12864-017-4304-3.

7.

Analysis of Drosophila melanogaster testis transcriptome.

Vedelek V, Bodai L, Grézal G, Kovács B, Boros IM, Laurinyecz B, Sinka R.

BMC Genomics. 2018 Sep 24;19(1):697. doi: 10.1186/s12864-018-5085-z.

8.

Functional genome annotation of Drosophila seminal fluid proteins using transcriptional genetic networks.

Ayroles JF, Laflamme BA, Stone EA, Wolfner MF, Mackay TF.

Genet Res (Camb). 2011 Dec;93(6):387-95. doi: 10.1017/S0016672311000346.

9.

Slowed aging during reproductive dormancy is reflected in genome-wide transcriptome changes in Drosophila melanogaster.

Kučerová L, Kubrak OI, Bengtsson JM, Strnad H, Nylin S, Theopold U, Nässel DR.

BMC Genomics. 2016 Jan 13;17:50. doi: 10.1186/s12864-016-2383-1.

10.

Classifying Drosophila Olfactory Projection Neuron Subtypes by Single-Cell RNA Sequencing.

Li H, Horns F, Wu B, Xie Q, Li J, Li T, Luginbuhl DJ, Quake SR, Luo L.

Cell. 2017 Nov 16;171(5):1206-1220.e22. doi: 10.1016/j.cell.2017.10.019.

11.

The Drosophila embryo at single-cell transcriptome resolution.

Karaiskos N, Wahle P, Alles J, Boltengagen A, Ayoub S, Kipar C, Kocks C, Rajewsky N, Zinzen RP.

Science. 2017 Oct 13;358(6360):194-199. doi: 10.1126/science.aan3235. Epub 2017 Aug 31.

PMID:
28860209
12.

Brain aging, memory impairment and oxidative stress: a study in Drosophila melanogaster.

Haddadi M, Jahromi SR, Sagar BK, Patil RK, Shivanandappa T, Ramesh SR.

Behav Brain Res. 2014 Feb 1;259:60-9. doi: 10.1016/j.bbr.2013.10.036. Epub 2013 Oct 30.

PMID:
24183945
13.

Specific age-related signatures in Drosophila body parts transcriptome.

Girardot F, Lasbleiz C, Monnier V, Tricoire H.

BMC Genomics. 2006 Apr 4;7:69.

14.

New levels of transcriptome complexity at upper thermal limits in wild Drosophila revealed by exon expression analysis.

Telonis-Scott M, van Heerwaarden B, Johnson TK, Hoffmann AA, Sgrò CM.

Genetics. 2013 Nov;195(3):809-30. doi: 10.1534/genetics.113.156224. Epub 2013 Sep 3.

15.

Identification of cell types in a mouse brain single-cell atlas using low sampling coverage.

Bhaduri A, Nowakowski TJ, Pollen AA, Kriegstein AR.

BMC Biol. 2018 Oct 11;16(1):113. doi: 10.1186/s12915-018-0580-x.

16.

Integrative analysis of the zinc finger transcription factor Lame duck in the Drosophila myogenic gene regulatory network.

Busser BW, Huang D, Rogacki KR, Lane EA, Shokri L, Ni T, Gamble CE, Gisselbrecht SS, Zhu J, Bulyk ML, Ovcharenko I, Michelson AM.

Proc Natl Acad Sci U S A. 2012 Dec 11;109(50):20768-73. doi: 10.1073/pnas.1210415109. Epub 2012 Nov 26.

17.

Defining the 5΄ and 3΄ landscape of the Drosophila transcriptome with Exo-seq and RNaseH-seq.

Afik S, Bartok O, Artyomov MN, Shishkin AA, Kadri S, Hanan M, Zhu X, Garber M, Kadener S.

Nucleic Acids Res. 2017 Jun 20;45(11):e95. doi: 10.1093/nar/gkx133.

18.

Transcriptomes of lineage-specific Drosophila neuroblasts profiled by genetic targeting and robotic sorting.

Yang CP, Fu CC, Sugino K, Liu Z, Ren Q, Liu LY, Yao X, Lee LP, Lee T.

Development. 2016 Feb 1;143(3):411-21. doi: 10.1242/dev.129163. Epub 2015 Dec 23.

19.

Frequent recent origination of brain genes shaped the evolution of foraging behavior in Drosophila.

Chen S, Spletter M, Ni X, White KP, Luo L, Long M.

Cell Rep. 2012 Feb 23;1(2):118-32. doi: 10.1016/j.celrep.2011.12.010. Epub 2012 Feb 16.

20.

Genetic Determinants of RNA Editing Levels of ADAR Targets in Drosophila melanogaster.

Kurmangaliyev YZ, Ali S, Nuzhdin SV.

G3 (Bethesda). 2015 Dec 12;6(2):391-6. doi: 10.1534/g3.115.024471.

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