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Universal Patterns of Selection in Cancer and Somatic Tissues.

Martincorena I, Raine KM, Gerstung M, Dawson KJ, Haase K, Van Loo P, Davies H, Stratton MR, Campbell PJ.

Cell. 2018 Jun 14;173(7):1823. doi: 10.1016/j.cell.2018.06.001. No abstract available.


A systems approach defining constraints of the genome architecture on lineage selection and evolvability during somatic cancer evolution.

Rübben A, Nordhoff O.

Biol Open. 2013 Jan 15;2(1):49-62. doi: 10.1242/bio.20122543. Epub 2012 Nov 2.


Somatic Mutation Patterns in Hemizygous Genomic Regions Unveil Purifying Selection during Tumor Evolution.

Van den Eynden J, Basu S, Larsson E.

PLoS Genet. 2016 Dec 27;12(12):e1006506. doi: 10.1371/journal.pgen.1006506. eCollection 2016 Dec.


Signs of positive selection of somatic mutations in human cancers detected by EST sequence analysis.

Babenko VN, Basu MK, Kondrashov FA, Rogozin IB, Koonin EV.

BMC Cancer. 2006 Feb 9;6:36.


X-chromosome inactivation and selection in somatic cells.

Gartler SM.

Fed Proc. 1976 Aug;35(10):2191-4.


Selection of a universal hybridizer in Sinapis turgida Del. and regeneration of plantlets from somatic hybrids with Brassica species.

Toriyama K, Kameya T, Hinata K.

Planta. 1987 Mar;170(3):308-13. doi: 10.1007/BF00395021.


Mutational patterns in the breast cancer mitochondrial genome, with clinical correlates.

McMahon S, LaFramboise T.

Carcinogenesis. 2014 May;35(5):1046-54. doi: 10.1093/carcin/bgu012. Epub 2014 Jan 18.


Important role of indels in somatic mutations of human cancer genes.

Yang H, Zhong Y, Peng C, Chen JQ, Tian D.

BMC Med Genet. 2010 Sep 1;11:128. doi: 10.1186/1471-2350-11-128.


Multi-regional sequencing reveals intratumor heterogeneity and positive selection of somatic mtDNA mutations in hepatocellular carcinoma and colorectal cancer.

Li X, Guo X, Li D, Du X, Yin C, Chen C, Fang W, Bian Z, Zhang J, Li B, Yang H, Xing J.

Int J Cancer. 2018 Sep 1;143(5):1143-1152. doi: 10.1002/ijc.31395. Epub 2018 Apr 16.


Uncovering the profile of somatic mtDNA mutations in Chinese colorectal cancer patients.

Wang CY, Li H, Hao XD, Liu J, Wang JX, Wang WZ, Kong QP, Zhang YP.

PLoS One. 2011;6(6):e21613. doi: 10.1371/journal.pone.0021613. Epub 2011 Jun 28.


Universal patterns of purifying selection at noncoding positions in bacteria.

Molina N, van Nimwegen E.

Genome Res. 2008 Jan;18(1):148-60. Epub 2007 Nov 21.


Extensive tissue-related and allele-related mtDNA heteroplasmy suggests positive selection for somatic mutations.

Li M, Schröder R, Ni S, Madea B, Stoneking M.

Proc Natl Acad Sci U S A. 2015 Feb 24;112(8):2491-6. doi: 10.1073/pnas.1419651112. Epub 2015 Feb 9.


Rapid identification of somatic mutations in colorectal and breast cancer tissues using mismatch repair detection (MRD).

Bentivegna S, Zheng J, Namsaraev E, Carlton VE, Pavlicek A, Moorhead M, Siddiqui F, Wang Z, Lee L, Ireland JS, Suyenaga K, Willis TD, Faham M, Seymour AB.

Hum Mutat. 2008 Mar;29(3):441-50. doi: 10.1002/humu.20672.


Animal cell differentiation patterns suppress somatic evolution.

Pepper JW, Sprouffske K, Maley CC.

PLoS Comput Biol. 2007 Dec;3(12):e250.


Efficient selection of somatic hybrids in Nicotiana tabacum L. using a combination of drug-resistance markers introduced by transformation.

Komari T, Saito Y, Nkaido F, Kumashiro T.

Theor Appl Genet. 1989 Apr;77(4):547-52. doi: 10.1007/BF00274277.


Unique somatic and malignant expression patterns implicate PIWI-interacting RNAs in cancer-type specific biology.

Martinez VD, Vucic EA, Thu KL, Hubaux R, Enfield KS, Pikor LA, Becker-Santos DD, Brown CJ, Lam S, Lam WL.

Sci Rep. 2015 May 27;5:10423. doi: 10.1038/srep10423.


D-loop somatic mutations and ∼5 kb "common" deletion in mitochondrial DNA: important molecular markers to distinguish oral precancer and cancer.

Datta S, Chattopadhyay E, Ray JG, Majumder M, Roy PD, Roy B.

Tumour Biol. 2015 Apr;36(4):3025-33. doi: 10.1007/s13277-014-2937-2. Epub 2014 Dec 20.


[Somatic mutation detection in complete mitochondrial DNA of lung cancer patients].

Liu L, Tan D, Wong LJ.

Zhongguo Fei Ai Za Zhi. 2004 Apr 20;7(2):125-9. doi: 10.3779/j.issn.1009-3419.2004.02.11. Chinese.


Quantitative analysis of DNA methylation at all human imprinted regions reveals preservation of epigenetic stability in adult somatic tissue.

Woodfine K, Huddleston JE, Murrell A.

Epigenetics Chromatin. 2011 Jan 31;4(1):1. doi: 10.1186/1756-8935-4-1.

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