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Items: 1 to 20 of 97


Divergence of Noncoding Regulatory Elements Explains Gene-Phenotype Differences between Human and Mouse Orthologous Genes.

Han SK, Kim D, Lee H, Kim I, Kim S.

Mol Biol Evol. 2018 Jul 1;35(7):1653-1667. doi: 10.1093/molbev/msy056.


Evolutionary conservation of expression profiles between human and mouse orthologous genes.

Liao BY, Zhang J.

Mol Biol Evol. 2006 Mar;23(3):530-40. Epub 2005 Nov 9.


Gene family level comparative analysis of gene expression in mammals validates the ortholog conjecture.

Rogozin IB, Managadze D, Shabalina SA, Koonin EV.

Genome Biol Evol. 2014 Apr;6(4):754-62. doi: 10.1093/gbe/evu051.


The importance of being cis: evolution of orthologous fish and mammalian enhancer activity.

Ritter DI, Li Q, Kostka D, Pollard KS, Guo S, Chuang JH.

Mol Biol Evol. 2010 Oct;27(10):2322-32. doi: 10.1093/molbev/msq128. Epub 2010 May 21.


Comparative analysis of noncoding sequences of orthologous bovine and human gene pairs.

Miziara MN, Riggs PK, Amaral ME.

Genet Mol Res. 2004 Dec 30;3(4):465-73.


Sense-antisense gene pairs: sequence, transcription, and structure are not conserved between human and mouse.

Wood EJ, Chin-Inmanu K, Jia H, Lipovich L.

Front Genet. 2013 Sep 26;4:183. doi: 10.3389/fgene.2013.00183. eCollection 2013.


Functional tests of enhancer conservation between distantly related species.

Ruvinsky I, Ruvkun G.

Development. 2003 Nov;130(21):5133-42. Epub 2003 Aug 27.


On the Use of Gene Ontology Annotations to Assess Functional Similarity among Orthologs and Paralogs: A Short Report.

Thomas PD, Wood V, Mungall CJ, Lewis SE, Blake JA; Gene Ontology Consortium.

PLoS Comput Biol. 2012;8(2):e1002386. doi: 10.1371/journal.pcbi.1002386. Epub 2012 Feb 16.


Evolutionary significance of gene expression divergence.

Jordan IK, Mariño-Ramírez L, Koonin EV.

Gene. 2005 Jan 17;345(1):119-26. Epub 2004 Dec 29.


A framework for comparing phenotype annotations of orthologous genes.

Bodenreider O, Burgun A.

Stud Health Technol Inform. 2010;160(Pt 2):1309-13.


Using shared genomic synteny and shared protein functions to enhance the identification of orthologous gene pairs.

Zheng XH, Lu F, Wang ZY, Zhong F, Hoover J, Mural R.

Bioinformatics. 2005 Mar;21(6):703-10. Epub 2004 Sep 30.


Systematic discovery of nonobvious human disease models through orthologous phenotypes.

McGary KL, Park TJ, Woods JO, Cha HJ, Wallingford JB, Marcotte EM.

Proc Natl Acad Sci U S A. 2010 Apr 6;107(14):6544-9. doi: 10.1073/pnas.0910200107. Epub 2010 Mar 22.


Complexity of gene expression evolution after duplication: protein dosage rebalancing.

Rogozin IB.

Genet Res Int. 2014;2014:516508. doi: 10.1155/2014/516508. Epub 2014 Aug 17. Review.


Global similarity and local divergence in human and mouse gene co-expression networks.

Tsaparas P, Mariño-Ramírez L, Bodenreider O, Koonin EV, Jordan IK.

BMC Evol Biol. 2006 Sep 12;6:70.


Cross-Species Analysis of Gene Expression and Function in Prefrontal Cortex, Hippocampus and Striatum.

Chen W, Xia X, Song N, Wang Y, Zhu H, Deng W, Kong Q, Pan X, Qin C.

PLoS One. 2016 Oct 7;11(10):e0164295. doi: 10.1371/journal.pone.0164295. eCollection 2016.


Imprinted genes show unique patterns of sequence conservation.

Hutter B, Bieg M, Helms V, Paulsen M.

BMC Genomics. 2010 Nov 22;11:649. doi: 10.1186/1471-2164-11-649.

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