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Items: 1 to 20 of 116

1.

Characterization of Human Salivary Extracellular RNA by Next-generation Sequencing.

Li F, Kaczor-Urbanowicz KE, Sun J, Majem B, Lo HC, Kim Y, Koyano K, Rao SL, Kang SY, Kim SM, Kim KM, Kim S, Chia D, Elashoff D, Grogan TR, Xiao X, Wong DTW.

Clin Chem. 2018 Jul;64(7):1085-1095. doi: 10.1373/clinchem.2017.285072. Epub 2018 Apr 23.

2.

The landscape of microRNA, Piwi-interacting RNA, and circular RNA in human saliva.

Bahn JH, Zhang Q, Li F, Chan TM, Lin X, Kim Y, Wong DT, Xiao X.

Clin Chem. 2015 Jan;61(1):221-30. doi: 10.1373/clinchem.2014.230433. Epub 2014 Nov 6.

3.

RNA Sequencing Analysis of Salivary Extracellular RNA.

Majem B, Li F, Sun J, Wong DT.

Methods Mol Biol. 2017;1537:17-36.

4.

A comparison of RNA extraction and sequencing protocols for detection of small RNAs in plasma.

Wong RKY, MacMahon M, Woodside JV, Simpson DA.

BMC Genomics. 2019 Jun 3;20(1):446. doi: 10.1186/s12864-019-5826-7.

5.

Preparation of Small RNA NGS Libraries from Biofluids.

Etheridge A, Wang K, Baxter D, Galas D.

Methods Mol Biol. 2018;1740:163-175. doi: 10.1007/978-1-4939-7652-2_13.

PMID:
29388143
6.

A technical assessment of the porcine ejaculated spermatozoa for a sperm-specific RNA-seq analysis.

Gòdia M, Mayer FQ, Nafissi J, Castelló A, Rodríguez-Gil JE, Sánchez A, Clop A.

Syst Biol Reprod Med. 2018 Aug;64(4):291-303. doi: 10.1080/19396368.2018.1464610. Epub 2018 Apr 26.

PMID:
29696996
7.

A comparative analysis of library prep approaches for sequencing low input translatome samples.

Song Y, Milon B, Ott S, Zhao X, Sadzewicz L, Shetty A, Boger ET, Tallon LJ, Morell RJ, Mahurkar A, Hertzano R.

BMC Genomics. 2018 Sep 21;19(1):696. doi: 10.1186/s12864-018-5066-2.

8.

Diversity and heterogeneity of extracellular RNA in human plasma.

Galvanin A, Dostert G, Ayadi L, Marchand V, Velot É, Motorin Y.

Biochimie. 2019 Sep;164:22-36. doi: 10.1016/j.biochi.2019.05.011. Epub 2019 May 17.

PMID:
31108123
9.

Characterization of human plasma-derived exosomal RNAs by deep sequencing.

Huang X, Yuan T, Tschannen M, Sun Z, Jacob H, Du M, Liang M, Dittmar RL, Liu Y, Liang M, Kohli M, Thibodeau SN, Boardman L, Wang L.

BMC Genomics. 2013 May 10;14:319. doi: 10.1186/1471-2164-14-319.

10.

Novel approaches for bioinformatic analysis of salivary RNA sequencing data for development.

Kaczor-Urbanowicz KE, Kim Y, Li F, Galeev T, Kitchen RR, Gerstein M, Koyano K, Jeong SH, Wang X, Elashoff D, Kang SY, Kim SM, Kim K, Kim S, Chia D, Xiao X, Rozowsky J, Wong DTW.

Bioinformatics. 2018 Jan 1;34(1):1-8. doi: 10.1093/bioinformatics/btx504.

11.

Comprehensive evaluation of extracellular small RNA isolation methods from serum in high throughput sequencing.

Guo Y, Vickers K, Xiong Y, Zhao S, Sheng Q, Zhang P, Zhou W, Flynn CR.

BMC Genomics. 2017 Jan 7;18(1):50. doi: 10.1186/s12864-016-3470-z.

12.

Optimization of extraction of circulating RNAs from plasma--enabling small RNA sequencing.

Spornraft M, Kirchner B, Haase B, Benes V, Pfaffl MW, Riedmaier I.

PLoS One. 2014 Sep 17;9(9):e107259. doi: 10.1371/journal.pone.0107259. eCollection 2014.

13.

Next-Generation Sequencing of Protein-Coding and Long Non-protein-Coding RNAs in Two Types of Exosomes Derived from Human Whole Saliva.

Ogawa Y, Tsujimoto M, Yanoshita R.

Biol Pharm Bull. 2016;39(9):1496-507. doi: 10.1248/bpb.b16-00297.

14.

High Throughput Sequencing of Extracellular RNA from Human Plasma.

Danielson KM, Rubio R, Abderazzaq F, Das S, Wang YE.

PLoS One. 2017 Jan 6;12(1):e0164644. doi: 10.1371/journal.pone.0164644. eCollection 2017.

15.

Comparison of RNA-Seq by poly (A) capture, ribosomal RNA depletion, and DNA microarray for expression profiling.

Zhao W, He X, Hoadley KA, Parker JS, Hayes DN, Perou CM.

BMC Genomics. 2014 Jun 2;15:419. doi: 10.1186/1471-2164-15-419.

16.

Systematic comparison of small RNA library preparation protocols for next-generation sequencing.

Dard-Dascot C, Naquin D, d'Aubenton-Carafa Y, Alix K, Thermes C, van Dijk E.

BMC Genomics. 2018 Feb 5;19(1):118. doi: 10.1186/s12864-018-4491-6.

17.

Comparison of RNA isolation and library preparation methods for small RNA sequencing of canine biofluids.

Chu CP, Nabity MB.

Vet Clin Pathol. 2019 Jun;48(2):310-319. doi: 10.1111/vcp.12743. Epub 2019 May 11.

PMID:
31077418
18.

Identification of extracellular miRNA in archived serum samples by next-generation sequencing from RNA extracted using multiple methods.

Gautam A, Kumar R, Dimitrov G, Hoke A, Hammamieh R, Jett M.

Mol Biol Rep. 2016 Oct;43(10):1165-78. doi: 10.1007/s11033-016-4043-6. Epub 2016 Aug 10.

19.

Isolating, Sequencing and Analyzing Extracellular MicroRNAs from Human Mesenchymal Stem Cells.

Yan Y, Chang CC, Venø MT, Mothershead CR, Su J, Kjems J.

J Vis Exp. 2019 Mar 8;(145). doi: 10.3791/58655.

PMID:
30907893
20.

Evaluation of two main RNA-seq approaches for gene quantification in clinical RNA sequencing: polyA+ selection versus rRNA depletion.

Zhao S, Zhang Y, Gamini R, Zhang B, von Schack D.

Sci Rep. 2018 Mar 19;8(1):4781. doi: 10.1038/s41598-018-23226-4.

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