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Items: 1 to 20 of 99

1.

Intergenic disease-associated regions are abundant in novel transcripts.

Bartonicek N, Clark MB, Quek XC, Torpy JR, Pritchard AL, Maag JLV, Gloss BS, Crawford J, Taft RJ, Hayward NK, Montgomery GW, Mattick JS, Mercer TR, Dinger ME.

Genome Biol. 2017 Dec 28;18(1):241. doi: 10.1186/s13059-017-1363-3.

2.

On the identification of potential regulatory variants within genome wide association candidate SNP sets.

Chen CY, Chang IS, Hsiung CA, Wasserman WW.

BMC Med Genomics. 2014 Jun 11;7:34. doi: 10.1186/1755-8794-7-34.

3.

Endometrial vezatin and its association with endometriosis risk.

Holdsworth-Carson SJ, Fung JN, Luong HT, Sapkota Y, Bowdler LM, Wallace L, Teh WT, Powell JE, Girling JE, Healey M, Montgomery GW, Rogers PA.

Hum Reprod. 2016 May;31(5):999-1013. doi: 10.1093/humrep/dew047. Epub 2016 Mar 22.

PMID:
27005890
4.

Large-scale East-Asian eQTL mapping reveals novel candidate genes for LD mapping and the genomic landscape of transcriptional effects of sequence variants.

Narahara M, Higasa K, Nakamura S, Tabara Y, Kawaguchi T, Ishii M, Matsubara K, Matsuda F, Yamada R.

PLoS One. 2014 Jun 23;9(6):e100924. doi: 10.1371/journal.pone.0100924. eCollection 2014.

5.

Laying a solid foundation for Manhattan--'setting the functional basis for the post-GWAS era'.

Zhang X, Bailey SD, Lupien M.

Trends Genet. 2014 Apr;30(4):140-9. doi: 10.1016/j.tig.2014.02.006. Epub 2014 Mar 22. Review.

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Single nucleotide polymorphisms with cis-regulatory effects on long non-coding transcripts in human primary monocytes.

Almlöf JC, Lundmark P, Lundmark A, Ge B, Pastinen T; Cardiogenics Consortium, Goodall AH, Cambien F, Deloukas P, Ouwehand WH, Syvänen AC.

PLoS One. 2014 Jul 15;9(7):e102612. doi: 10.1371/journal.pone.0102612. eCollection 2014.

9.

Replication of genome-wide association study (GWAS) susceptibility loci in a Latino bipolar disorder cohort.

Gonzalez S, Gupta J, Villa E, Mallawaarachchi I, Rodriguez M, Ramirez M, Zavala J, Armas R, Dassori A, Contreras J, Flores D, Jerez A, Ontiveros A, Nicolini H, Escamilla M.

Bipolar Disord. 2016 Sep;18(6):520-527. doi: 10.1111/bdi.12438.

10.

LincSNP: a database of linking disease-associated SNPs to human large intergenic non-coding RNAs.

Ning S, Zhao Z, Ye J, Wang P, Zhi H, Li R, Wang T, Li X.

BMC Bioinformatics. 2014 May 20;15:152. doi: 10.1186/1471-2105-15-152.

11.

Integrative genetic analysis suggests that skin color modifies the genetic architecture of melanoma.

Hulur I, Skol AD, Gamazon ER, Cox NJ, Onel K.

PLoS One. 2017 Oct 3;12(10):e0185730. doi: 10.1371/journal.pone.0185730. eCollection 2017.

12.

Where in the genome are significant single nucleotide polymorphisms from genome-wide association studies located?

Günther T, Schmitt AO, Bortfeldt RH, Hinney A, Hebebrand J, Brockmann GA.

OMICS. 2011 Jul-Aug;15(7-8):507-12. doi: 10.1089/omi.2010.0154. Epub 2011 Jun 23.

PMID:
21699402
13.

Integrated genome-wide analysis of expression quantitative trait loci aids interpretation of genomic association studies.

Joehanes R, Zhang X, Huan T, Yao C, Ying SX, Nguyen QT, Demirkale CY, Feolo ML, Sharopova NR, Sturcke A, Schäffer AA, Heard-Costa N, Chen H, Liu PC, Wang R, Woodhouse KA, Tanriverdi K, Freedman JE, Raghavachari N, Dupuis J, Johnson AD, O'Donnell CJ, Levy D, Munson PJ.

Genome Biol. 2017 Jan 25;18(1):16. doi: 10.1186/s13059-016-1142-6.

14.

Genome-wide meta-analysis identifies five new susceptibility loci for cutaneous malignant melanoma.

Law MH, Bishop DT, Lee JE, Brossard M, Martin NG, Moses EK, Song F, Barrett JH, Kumar R, Easton DF, Pharoah PDP, Swerdlow AJ, Kypreou KP, Taylor JC, Harland M, Randerson-Moor J, Akslen LA, Andresen PA, Avril MF, Azizi E, Scarrà GB, Brown KM, Dębniak T, Duffy DL, Elder DE, Fang S, Friedman E, Galan P, Ghiorzo P, Gillanders EM, Goldstein AM, Gruis NA, Hansson J, Helsing P, Hočevar M, Höiom V, Ingvar C, Kanetsky PA, Chen WV; GenoMEL Consortium; Essen-Heidelberg Investigators; SDH Study Group; Q-MEGA and QTWIN Investigators; AMFS Investigators; ATHENS Melanoma Study Group, Landi MT, Lang J, Lathrop GM, Lubiński J, Mackie RM, Mann GJ, Molven A, Montgomery GW, Novaković S, Olsson H, Puig S, Puig-Butille JA, Qureshi AA, Radford-Smith GL, van der Stoep N, van Doorn R, Whiteman DC, Craig JE, Schadendorf D, Simms LA, Burdon KP, Nyholt DR, Pooley KA, Orr N, Stratigos AJ, Cust AE, Ward SV, Hayward NK, Han J, Schulze HJ, Dunning AM, Bishop JAN, Demenais F, Amos CI, MacGregor S, Iles MM.

Nat Genet. 2015 Sep;47(9):987-995. doi: 10.1038/ng.3373. Epub 2015 Aug 3.

15.

SNP- and haplotype-based genome-wide association studies for growth, carcass, and meat quality traits in a Duroc multigenerational population.

Sato S, Uemoto Y, Kikuchi T, Egawa S, Kohira K, Saito T, Sakuma H, Miyashita S, Arata S, Kojima T, Suzuki K.

BMC Genet. 2016 Apr 19;17:60. doi: 10.1186/s12863-016-0368-3.

16.

Genetic variants in the integrin signaling pathway genes predict cutaneous melanoma survival.

Li H, Wang Y, Liu H, Shi Q, Xu Y, Wu W, Zhu D, Amos CI, Fang S, Lee JE, Han J, Wei Q.

Int J Cancer. 2017 Mar 15;140(6):1270-1279. doi: 10.1002/ijc.30545. Epub 2016 Dec 19.

17.

Cellular dissection of psoriasis for transcriptome analyses and the post-GWAS era.

Swindell WR, Stuart PE, Sarkar MK, Voorhees JJ, Elder JT, Johnston A, Gudjonsson JE.

BMC Med Genomics. 2014 May 22;7:27. doi: 10.1186/1755-8794-7-27.

18.

Genome-wide transcript profiling reveals novel breast cancer-associated intronic sense RNAs.

Kim SW, Fishilevich E, Arango-Argoty G, Lin Y, Liu G, Li Z, Monaghan AP, Nichols M, John B.

PLoS One. 2015 Mar 23;10(3):e0120296. doi: 10.1371/journal.pone.0120296. eCollection 2015.

19.

Genome-wide association study identifies novel loci predisposing to cutaneous melanoma.

Amos CI, Wang LE, Lee JE, Gershenwald JE, Chen WV, Fang S, Kosoy R, Zhang M, Qureshi AA, Vattathil S, Schacherer CW, Gardner JM, Wang Y, Bishop DT, Barrett JH; GenoMEL Investigators, MacGregor S, Hayward NK, Martin NG, Duffy DL; Q-Mega Investigators, Mann GJ, Cust A, Hopper J; AMFS Investigators, Brown KM, Grimm EA, Xu Y, Han Y, Jing K, McHugh C, Laurie CC, Doheny KF, Pugh EW, Seldin MF, Han J, Wei Q.

Hum Mol Genet. 2011 Dec 15;20(24):5012-23. doi: 10.1093/hmg/ddr415. Epub 2011 Sep 17.

20.

Transcriptome analysis of smut fungi reveals widespread intergenic transcription and conserved antisense transcript expression.

Donaldson ME, Ostrowski LA, Goulet KM, Saville BJ.

BMC Genomics. 2017 May 2;18(1):340. doi: 10.1186/s12864-017-3720-8.

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