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Items: 1 to 20 of 217

1.

Insights into Land Plant Evolution Garnered from the Marchantia polymorpha Genome.

Bowman JL, Kohchi T, Yamato KT, Jenkins J, Shu S, Ishizaki K, Yamaoka S, Nishihama R, Nakamura Y, Berger F, Adam C, Aki SS, Althoff F, Araki T, Arteaga-Vazquez MA, Balasubrmanian S, Barry K, Bauer D, Boehm CR, Briginshaw L, Caballero-Perez J, Catarino B, Chen F, Chiyoda S, Chovatia M, Davies KM, Delmans M, Demura T, Dierschke T, Dolan L, Dorantes-Acosta AE, Eklund DM, Florent SN, Flores-Sandoval E, Fujiyama A, Fukuzawa H, Galik B, Grimanelli D, Grimwood J, Grossniklaus U, Hamada T, Haseloff J, Hetherington AJ, Higo A, Hirakawa Y, Hundley HN, Ikeda Y, Inoue K, Inoue SI, Ishida S, Jia Q, Kakita M, Kanazawa T, Kawai Y, Kawashima T, Kennedy M, Kinose K, Kinoshita T, Kohara Y, Koide E, Komatsu K, Kopischke S, Kubo M, Kyozuka J, Lagercrantz U, Lin SS, Lindquist E, Lipzen AM, Lu CW, De Luna E, Martienssen RA, Minamino N, Mizutani M, Mizutani M, Mochizuki N, Monte I, Mosher R, Nagasaki H, Nakagami H, Naramoto S, Nishitani K, Ohtani M, Okamoto T, Okumura M, Phillips J, Pollak B, Reinders A, Rövekamp M, Sano R, Sawa S, Schmid MW, Shirakawa M, Solano R, Spunde A, Suetsugu N, Sugano S, Sugiyama A, Sun R, Suzuki Y, Takenaka M, Takezawa D, Tomogane H, Tsuzuki M, Ueda T, Umeda M, Ward JM, Watanabe Y, Yazaki K, Yokoyama R, Yoshitake Y, Yotsui I, Zachgo S, Schmutz J.

Cell. 2017 Oct 5;171(2):287-304.e15. doi: 10.1016/j.cell.2017.09.030.

2.

Class C ARFs evolved before the origin of land plants and antagonize differentiation and developmental transitions in Marchantia polymorpha.

Flores-Sandoval E, Eklund DM, Hong SF, Alvarez JP, Fisher TJ, Lampugnani ER, Golz JF, Vázquez-Lobo A, Dierschke T, Lin SS, Bowman JL.

New Phytol. 2018 Jun;218(4):1612-1630. doi: 10.1111/nph.15090. Epub 2018 Mar 25. Erratum in: New Phytol. 2019 Jan;221(2):1172.

3.

Auxin-Mediated Transcriptional System with a Minimal Set of Components Is Critical for Morphogenesis through the Life Cycle in Marchantia polymorpha.

Kato H, Ishizaki K, Kouno M, Shirakawa M, Bowman JL, Nishihama R, Kohchi T.

PLoS Genet. 2015 May 28;11(5):e1005084. doi: 10.1371/journal.pgen.1005084. eCollection 2015 May. Erratum in: PLoS Genet. 2015 Jun;11(6):e1005365.

4.

Genome-wide analysis of MpBHLH12, a IIIf basic helix-loop-helix transcription factor of Marchantia polymorpha.

Arai H, Yanagiura K, Toyama Y, Morohashi K.

J Plant Res. 2019 Mar;132(2):197-209. doi: 10.1007/s10265-019-01095-w. Epub 2019 Mar 6.

PMID:
30840209
5.

Profiling and Characterization of Small RNAs in the Liverwort, Marchantia polymorpha, Belonging to the First Diverged Land Plants.

Tsuzuki M, Nishihama R, Ishizaki K, Kurihara Y, Matsui M, Bowman JL, Kohchi T, Hamada T, Watanabe Y.

Plant Cell Physiol. 2016 Feb;57(2):359-72. doi: 10.1093/pcp/pcv182. Epub 2015 Nov 19.

PMID:
26589267
6.

Evolution and co-option of developmental regulatory networks in early land plants.

Bowman JL, Briginshaw LN, Florent SN.

Curr Top Dev Biol. 2019;131:35-53. doi: 10.1016/bs.ctdb.2018.10.001. Epub 2018 Dec 3. Review.

PMID:
30612623
7.

Genetic analysis of the liverwort Marchantia polymorpha reveals that R2R3MYB activation of flavonoid production in response to abiotic stress is an ancient character in land plants.

Albert NW, Thrimawithana AH, McGhie TK, Clayton WA, Deroles SC, Schwinn KE, Bowman JL, Jordan BR, Davies KM.

New Phytol. 2018 Apr;218(2):554-566. doi: 10.1111/nph.15002. Epub 2018 Jan 24.

8.

A Simple Auxin Transcriptional Response System Regulates Multiple Morphogenetic Processes in the Liverwort Marchantia polymorpha.

Flores-Sandoval E, Eklund DM, Bowman JL.

PLoS Genet. 2015 May 28;11(5):e1005207. doi: 10.1371/journal.pgen.1005207. eCollection 2015 May. Erratum in: PLoS Genet. 2016 Feb;12(2):e1005900.

9.

Abscisic acid-induced gene expression in the liverwort Marchantia polymorpha is mediated by evolutionarily conserved promoter elements.

Ghosh TK, Kaneko M, Akter K, Murai S, Komatsu K, Ishizaki K, Yamato KT, Kohchi T, Takezawa D.

Physiol Plant. 2016 Apr;156(4):407-20. doi: 10.1111/ppl.12385. Epub 2015 Oct 12.

PMID:
26456006
11.

Transcriptome-wide profiling and expression analysis of transcription factor families in a liverwort, Marchantia polymorpha.

Sharma N, Bhalla PL, Singh MB.

BMC Genomics. 2013 Dec 23;14:915. doi: 10.1186/1471-2164-14-915.

12.

Land Plant Model Systems Branch Out.

Delwiche CF, Goodman CA, Chang C.

Cell. 2017 Oct 5;171(2):265-266. doi: 10.1016/j.cell.2017.09.036.

13.

MicroRNAs in Marchantia polymorpha.

Lin SS, Bowman JL.

New Phytol. 2018 Oct;220(2):409-416. doi: 10.1111/nph.15294. Epub 2018 Jun 30. Review.

14.

Early evolution of the land plant circadian clock.

Linde AM, Eklund DM, Kubota A, Pederson ERA, Holm K, Gyllenstrand N, Nishihama R, Cronberg N, Muranaka T, Oyama T, Kohchi T, Lagercrantz U.

New Phytol. 2017 Oct;216(2):576-590. doi: 10.1111/nph.14487. Epub 2017 Feb 28.

15.

Marchantia MpRKD Regulates the Gametophyte-Sporophyte Transition by Keeping Egg Cells Quiescent in the Absence of Fertilization.

Rövekamp M, Bowman JL, Grossniklaus U.

Curr Biol. 2016 Jul 11;26(13):1782-1789. doi: 10.1016/j.cub.2016.05.028. Epub 2016 Jun 23.

16.

Subfunctionalization of sigma factors during the evolution of land plants based on mutant analysis of liverwort (Marchantia polymorpha L.) MpSIG1.

Ueda M, Takami T, Peng L, Ishizaki K, Kohchi T, Shikanai T, Nishimura Y.

Genome Biol Evol. 2013;5(10):1836-48. doi: 10.1093/gbe/evt137.

17.

Evolutionary origin of phytochrome responses and signaling in land plants.

Inoue K, Nishihama R, Kohchi T.

Plant Cell Environ. 2017 Nov;40(11):2502-2508. doi: 10.1111/pce.12908. Epub 2017 Mar 1. Review.

PMID:
28098347
18.

RNA sequencing analysis of the gametophyte transcriptome from the liverwort, Marchantia polymorpha.

Sharma N, Jung CH, Bhalla PL, Singh MB.

PLoS One. 2014 May 19;9(5):e97497. doi: 10.1371/journal.pone.0097497. eCollection 2014.

20.

Visualization of auxin-mediated transcriptional activation using a common auxin-responsive reporter system in the liverwort Marchantia polymorpha.

Ishizaki K, Nonomura M, Kato H, Yamato KT, Kohchi T.

J Plant Res. 2012 Sep;125(5):643-51. doi: 10.1007/s10265-012-0477-7. Epub 2012 Feb 4.

PMID:
22311005

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