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Items: 1 to 20 of 94

1.

Differential Enzymatic 16O/18O Labeling for the Detection of Cross-Linked Nucleic Acid-Protein Heteroconjugates.

Flett FJ, Sachsenberg T, Kohlbacher O, Mackay CL, Interthal H.

Anal Chem. 2017 Nov 7;89(21):11208-11213. doi: 10.1021/acs.analchem.7b01625. Epub 2017 Oct 13.

2.

Click chemistry generated model DNA-peptide heteroconjugates as tools for mass spectrometry.

Flett FJ, Walton JG, Mackay CL, Interthal H.

Anal Chem. 2015 Oct 6;87(19):9595-9. doi: 10.1021/acs.analchem.5b02047.

PMID:
26335278
3.
4.

Quantitative cross-linking/mass spectrometry to elucidate structural changes in proteins and their complexes.

Chen ZA, Rappsilber J.

Nat Protoc. 2019 Jan;14(1):171-201. doi: 10.1038/s41596-018-0089-3.

PMID:
30559374
5.

Quantitative protein analysis using enzymatic [¹⁸O]water labeling.

Castillo MJ, Reynolds KJ, Gomes A, Fenselau C, Yao X.

Curr Protoc Protein Sci. 2014 Apr 1;76:23.4.1-9. doi: 10.1002/0471140864.ps2304s76. Review.

7.

18O stable isotope labeling in MS-based proteomics.

Ye X, Luke B, Andresson T, Blonder J.

Brief Funct Genomic Proteomic. 2009 Mar;8(2):136-44. doi: 10.1093/bfgp/eln055. Epub 2009 Jan 16. Review.

8.

Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteins.

Kramer K, Sachsenberg T, Beckmann BM, Qamar S, Boon KL, Hentze MW, Kohlbacher O, Urlaub H.

Nat Methods. 2014 Oct;11(10):1064-70. doi: 10.1038/nmeth.3092. Epub 2014 Aug 31.

9.

Analysis of protein-nucleic acid interactions by photochemical cross-linking and mass spectrometry.

Steen H, Jensen ON.

Mass Spectrom Rev. 2002 May-Jun;21(3):163-82. Review.

PMID:
12476441
11.

Targeted 18O-labeling for improved proteomic analysis of carbonylated peptides by mass spectrometry.

Roe MR, McGowan TF, Thompson LV, Griffin TJ.

J Am Soc Mass Spectrom. 2010 Jul;21(7):1190-203. doi: 10.1016/j.jasms.2010.03.029. Epub 2010 Mar 29.

12.

Simultaneous quantification and identification using 18O labeling with an ion trap mass spectrometer and the analysis software application "ZoomQuant".

Hicks WA, Halligan BD, Slyper RY, Twigger SN, Greene AS, Olivier M.

J Am Soc Mass Spectrom. 2005 Jun;16(6):916-25. Epub 2005 Apr 15.

13.

Post-digestion ¹⁸O exchange/labeling for quantitative shotgun proteomics of membrane proteins.

Ye X, Luke BT, Johann DJ Jr, Chan KC, Prieto DA, Ono A, Veenstra TD, Blonder J.

Methods Mol Biol. 2012;893:223-40. doi: 10.1007/978-1-61779-885-6_15.

PMID:
22665304
14.

Protease- and acid-catalyzed labeling workflows employing (18)O-enriched water.

Klingler D, Hardt M.

J Vis Exp. 2013 Feb 20;(72):e3891. doi: 10.3791/3891.

15.

Regression analysis for comparing protein samples with 16O/18O stable-isotope labeled mass spectrometry.

Eckel-Passow JE, Oberg AL, Therneau TM, Mason CJ, Mahoney DW, Johnson KL, Olson JE, Bergen HR 3rd.

Bioinformatics. 2006 Nov 15;22(22):2739-45. Epub 2006 Sep 5.

PMID:
16954138
16.

Minimize the detection of false positives by the software program DetectShift for 18O-labeled cross-linked peptide analysis.

Gao Q, Xue S, Shaffer SA, Doneanu CE, Goodlett DR, Nelson SD.

Eur J Mass Spectrom (Chichester). 2008;14(5):275-80. doi: 10.1255/ejms.939.

17.

Large-scale multiplexed quantitative discovery proteomics enabled by the use of an (18)O-labeled "universal" reference sample.

Qian WJ, Liu T, Petyuk VA, Gritsenko MA, Petritis BO, Polpitiya AD, Kaushal A, Xiao W, Finnerty CC, Jeschke MG, Jaitly N, Monroe ME, Moore RJ, Moldawer LL, Davis RW, Tompkins RG, Herndon DN, Camp DG, Smith RD; Inflammation and the Host Response to Injury Large Scale Collaborative Research Program.

J Proteome Res. 2009 Jan;8(1):290-9. doi: 10.1021/pr800467r.

18.

Trypsin-mediated ¹⁸O/¹⁶O labeling for biomarker discovery.

Ye X, Chan KC, Prieto DA, Luke BT, Johann DJ Jr, Stockwin LH, Newton DL, Blonder J.

Methods Mol Biol. 2013;1002:133-49. doi: 10.1007/978-1-62703-360-2_12.

PMID:
23625401
19.

Considerations for proteolytic labeling-optimization of 18O incorporation and prohibition of back-exchange.

Storms HF, van der Heijden R, Tjaden UR, van der Greef J.

Rapid Commun Mass Spectrom. 2006;20(23):3491-7.

PMID:
17072904

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