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Items: 1 to 20 of 127

1.

Draft Genome of Scalindua rubra, Obtained from the Interface Above the Discovery Deep Brine in the Red Sea, Sheds Light on Potential Salt Adaptation Strategies in Anammox Bacteria.

Speth DR, Lagkouvardos I, Wang Y, Qian PY, Dutilh BE, Jetten MSM.

Microb Ecol. 2017 Jul;74(1):1-5. doi: 10.1007/s00248-017-0929-7. Epub 2017 Jan 10.

2.

A microdiversity study of anammox bacteria reveals a novel Candidatus Scalindua phylotype in marine oxygen minimum zones.

Woebken D, Lam P, Kuypers MM, Naqvi SW, Kartal B, Strous M, Jetten MS, Fuchs BM, Amann R.

Environ Microbiol. 2008 Nov;10(11):3106-19. doi: 10.1111/j.1462-2920.2008.01640.x. Epub 2008 May 27. Erratum in: Environ Microbiol. 2010 Aug;12(8):2384.

PMID:
18510553
3.

Candidatus "Scalindua brodae", sp. nov., Candidatus "Scalindua wagneri", sp. nov., two new species of anaerobic ammonium oxidizing bacteria.

Schmid M, Walsh K, Webb R, Rijpstra WI, van de Pas-Schoonen K, Verbruggen MJ, Hill T, Moffett B, Fuerst J, Schouten S, Damsté JS, Harris J, Shaw P, Jetten M, Strous M.

Syst Appl Microbiol. 2003 Nov;26(4):529-38.

PMID:
14666981
4.

Molecular detection of Candidatus Scalindua pacifica and environmental responses of sediment anammox bacterial community in the Bohai Sea, China.

Dang H, Zhou H, Zhang Z, Yu Z, Hua E, Liu X, Jiao N.

PLoS One. 2013;8(4):e61330. doi: 10.1371/journal.pone.0061330. Epub 2013 Apr 8.

5.

New PCR primers targeting hydrazine synthase and cytochrome c biogenesis proteins in anammox bacteria.

Zhou Z, Chen J, Meng H, Dvornyk V, Gu JD.

Appl Microbiol Biotechnol. 2017 Feb;101(3):1267-1287. doi: 10.1007/s00253-016-8013-7. Epub 2016 Dec 28.

PMID:
28032194
6.

The diversity and distribution of anammox bacteria in the marine aquaculture zones.

Li M, Gu JD.

Appl Microbiol Biotechnol. 2016 Oct;100(20):8943-53. doi: 10.1007/s00253-016-7690-6. Epub 2016 Jul 2.

PMID:
27368740
7.

Enrichment and characterization of marine anammox bacteria associated with global nitrogen gas production.

van de Vossenberg J, Rattray JE, Geerts W, Kartal B, van Niftrik L, van Donselaar EG, Sinninghe Damsté JS, Strous M, Jetten MS.

Environ Microbiol. 2008 Nov;10(11):3120-9. doi: 10.1111/j.1462-2920.2008.01643.x. Epub 2008 May 6.

PMID:
18462401
8.

Shotgun metagenomic data reveals significant abundance but low diversity of "Candidatus Scalindua" marine anammox bacteria in the Arabian Sea oxygen minimum zone.

Villanueva L, Speth DR, van Alen T, Hoischen A, Jetten MS.

Front Microbiol. 2014 Feb 5;5:31. doi: 10.3389/fmicb.2014.00031. eCollection 2014.

9.

Anammox bacterial populations in deep marine hypersaline gradient systems.

Borin S, Mapelli F, Rolli E, Song B, Tobias C, Schmid MC, De Lange GJ, Reichart GJ, Schouten S, Jetten M, Daffonchio D.

Extremophiles. 2013 Mar;17(2):289-99. doi: 10.1007/s00792-013-0516-x. Epub 2013 Jan 23.

PMID:
23340764
10.

Comparative analysis of two 16S rRNA gene-based PCR primer sets provides insight into the diversity distribution patterns of anammox bacteria in different environments.

Wang S, Hong Y, Wu J, Xu XR, Bin L, Pan Y, Guan F, Wen J.

Appl Microbiol Biotechnol. 2015 Oct;99(19):8163-76. doi: 10.1007/s00253-015-6814-8. Epub 2015 Aug 1.

PMID:
26231134
11.

Effects of Salts on the Activity and Growth of "Candidatus Scalindua sp.", a Marine Anammox Bacterium.

Mojiri A, Nishimoto K, Awata T, Aoi Y, Ozaki N, Ohashi A, Kindaichi T.

Microbes Environ. 2018 Sep 29;33(3):336-339. doi: 10.1264/jsme2.ME18068. Epub 2018 Aug 24.

12.

Molecular detection of anaerobic ammonium-oxidizing (anammox) bacteria in high-temperature petroleum reservoirs.

Li H, Chen S, Mu BZ, Gu JD.

Microb Ecol. 2010 Nov;60(4):771-83. doi: 10.1007/s00248-010-9733-3. Epub 2010 Aug 26.

13.

Community structures and distribution of anaerobic ammonium oxidizing and nirS-encoding nitrite-reducing bacteria in surface sediments of the South China Sea.

Li M, Hong Y, Cao H, Gu JD.

Microb Ecol. 2013 Aug;66(2):281-96. doi: 10.1007/s00248-012-0175-y. Epub 2013 Jan 29.

PMID:
23354291
14.
15.

A comparison of primer sets for detecting 16S rRNA and hydrazine oxidoreductase genes of anaerobic ammonium-oxidizing bacteria in marine sediments.

Li M, Hong Y, Klotz MG, Gu JD.

Appl Microbiol Biotechnol. 2010 Mar;86(2):781-90. doi: 10.1007/s00253-009-2361-5. Epub 2010 Jan 27.

PMID:
20107988
16.

Diversification and niche adaptations of Nitrospina-like bacteria in the polyextreme interfaces of Red Sea brines.

Ngugi DK, Blom J, Stepanauskas R, Stingl U.

ISME J. 2016 Jun;10(6):1383-99. doi: 10.1038/ismej.2015.214. Epub 2015 Dec 11.

17.

Free-living and aggregate-associated Planctomycetes in the Black Sea.

Fuchsman CA, Staley JT, Oakley BB, Kirkpatrick JB, Murray JW.

FEMS Microbiol Ecol. 2012 May;80(2):402-16. doi: 10.1111/j.1574-6941.2012.01306.x. Epub 2012 Feb 7.

18.

Enrichment of anammox bacteria from marine environment for the construction of a bioremediation reactor.

Nakajima J, Sakka M, Kimura T, Furukawa K, Sakka K.

Appl Microbiol Biotechnol. 2008 Jan;77(5):1159-66. Epub 2007 Oct 27.

PMID:
17965857
19.

Assessment of molecular detection of anaerobic ammonium-oxidizing (anammox) bacteria in different environmental samples using PCR primers based on 16S rRNA and functional genes.

Han P, Klümper U, Wong A, Li M, Lin JG, Quan Z, Denecke M, Gu JD.

Appl Microbiol Biotechnol. 2017 Oct;101(20):7689-7702. doi: 10.1007/s00253-017-8502-3. Epub 2017 Sep 20.

PMID:
28932888
20.

The metagenome of the marine anammox bacterium 'Candidatus Scalindua profunda' illustrates the versatility of this globally important nitrogen cycle bacterium.

van de Vossenberg J, Woebken D, Maalcke WJ, Wessels HJ, Dutilh BE, Kartal B, Janssen-Megens EM, Roeselers G, Yan J, Speth D, Gloerich J, Geerts W, van der Biezen E, Pluk W, Francoijs KJ, Russ L, Lam P, Malfatti SA, Tringe SG, Haaijer SC, Op den Camp HJ, Stunnenberg HG, Amann R, Kuypers MM, Jetten MS.

Environ Microbiol. 2013 May;15(5):1275-89. doi: 10.1111/j.1462-2920.2012.02774.x. Epub 2012 May 9.

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