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Items: 1 to 20 of 93

1.

Droplet digital PCR quantifies host inflammatory transcripts in feces reliably and reproducibly.

Stauber J, Shaikh N, Ordiz MI, Tarr PI, Manary MJ.

Cell Immunol. 2016 May;303:43-9. doi: 10.1016/j.cellimm.2016.03.007. Epub 2016 Apr 6.

2.

Detection of low-concentration host mRNA transcripts in Malawian children at risk for environmental enteropathy.

Agapova S, Stephenson K, Manary M, Weisz A, Tarr PI, Mkakosya R, Maleta K, Shulman RJ, Manary M, Shaikh N.

J Pediatr Gastroenterol Nutr. 2013 Jan;56(1):66-71. doi: 10.1097/MPG.0b013e31826a107a.

PMID:
22832511
3.

Detection and interpretation of fecal host mRNA in rural Malawian infants aged 6-12 months at risk for environmental enteric dysfunction.

Ordiz MI, Wold K, Kaimila Y, Divala O, Gilstrap M, Lu HZ, Manary MJ.

Exp Biol Med (Maywood). 2018 Aug;243(12):985-989. doi: 10.1177/1535370218794418. Epub 2018 Aug 12.

PMID:
30099958
4.

Droplet digital PCR for quantification of ITGA6 in a stool mRNA assay for the detection of colorectal cancers.

Herring E, Kanaoka S, Tremblay É, Beaulieu JF.

World J Gastroenterol. 2017 Apr 28;23(16):2891-2898. doi: 10.3748/wjg.v23.i16.2891.

5.

Comparison of next-generation droplet digital PCR (ddPCR) with quantitative PCR (qPCR) for enumeration of Cryptosporidium oocysts in faecal samples.

Yang R, Paparini A, Monis P, Ryan U.

Int J Parasitol. 2014 Dec;44(14):1105-13. doi: 10.1016/j.ijpara.2014.08.004. Epub 2014 Sep 16.

PMID:
25229177
6.

Droplet digital PCR for simultaneous quantification of general and human-associated fecal indicators for water quality assessment.

Cao Y, Raith MR, Griffith JF.

Water Res. 2015 Mar 1;70:337-49. doi: 10.1016/j.watres.2014.12.008. Epub 2014 Dec 16.

PMID:
25543243
7.

Optimization of digital droplet polymerase chain reaction for quantification of genetically modified organisms.

Gerdes L, Iwobi A, Busch U, Pecoraro S.

Biomol Detect Quantif. 2016 Jan 7;7:9-20. doi: 10.1016/j.bdq.2015.12.003. eCollection 2016 Mar.

8.

Environmental Enteric Dysfunction Includes a Broad Spectrum of Inflammatory Responses and Epithelial Repair Processes.

Yu J, Ordiz MI, Stauber J, Shaikh N, Trehan I, Barnell E, Head RD, Maleta K, Tarr PI, Manary MJ.

Cell Mol Gastroenterol Hepatol. 2015 Dec 11;2(2):158-174.e1. eCollection 2016 Feb.

9.

A comparison of DNA methylation specific droplet digital PCR (ddPCR) and real time qPCR with flow cytometry in characterizing human T cells in peripheral blood.

Wiencke JK, Bracci PM, Hsuang G, Zheng S, Hansen H, Wrensch MR, Rice T, Eliot M, Kelsey KT.

Epigenetics. 2014 Oct;9(10):1360-5. doi: 10.4161/15592294.2014.967589.

10.

Validation of an ultrasensitive digital droplet PCR assay for HIV-2 plasma RNA quantification.

Ruelle J, Yfantis V, Duquenne A, Goubau P.

J Int AIDS Soc. 2014 Nov 2;17(4 Suppl 3):19675. doi: 10.7448/IAS.17.4.19675. eCollection 2014.

11.

Comparison of a quantitative Real-Time PCR assay and droplet digital PCR for copy number analysis of the CCL4L genes.

Bharuthram A, Paximadis M, Picton AC, Tiemessen CT.

Infect Genet Evol. 2014 Jul;25:28-35. doi: 10.1016/j.meegid.2014.03.028. Epub 2014 Apr 12.

PMID:
24727646
12.

Optimization of Droplet Digital PCR from RNA and DNA extracts with direct comparison to RT-qPCR: Clinical implications for quantification of Oseltamivir-resistant subpopulations.

Taylor SC, Carbonneau J, Shelton DN, Boivin G.

J Virol Methods. 2015 Nov;224:58-66. doi: 10.1016/j.jviromet.2015.08.014. Epub 2015 Aug 24.

13.

IDH1 mutation detection by droplet digital PCR in glioma.

Wang J, Zhao YY, Li JF, Guo CC, Chen FR, Su HK, Zhao HF, Long YK, Shao JY, To Ss, Chen ZP.

Oncotarget. 2015 Nov 24;6(37):39651-60. doi: 10.18632/oncotarget.5630.

14.

Quantitative analysis of food and feed samples with droplet digital PCR.

Morisset D, Štebih D, Milavec M, Gruden K, Žel J.

PLoS One. 2013 May 2;8(5):e62583. doi: 10.1371/journal.pone.0062583. Print 2013.

16.

Comparison of droplet digital PCR and conventional quantitative PCR for measuring EGFR gene mutation.

Zhang BO, Xu CW, Shao Y, Wang HT, Wu YF, Song YY, Li XB, Zhang Z, Wang WJ, Li LQ, Cai CL.

Exp Ther Med. 2015 Apr;9(4):1383-1388. Epub 2015 Jan 27.

17.

Droplet digital polymerase chain reaction detection of HER2 amplification in formalin fixed paraffin embedded breast and gastric carcinoma samples.

Zhu Y, Lu D, Lira ME, Xu Q, Du Y, Xiong J, Mao M, Chung HC, Zheng G.

Exp Mol Pathol. 2016 Apr;100(2):287-93. doi: 10.1016/j.yexmp.2015.11.027. Epub 2015 Nov 25.

PMID:
26626802
18.

Low copy target detection by Droplet Digital PCR through application of a novel open access bioinformatic pipeline, 'definetherain'.

Jones M, Williams J, Gärtner K, Phillips R, Hurst J, Frater J.

J Virol Methods. 2014 Jun;202:46-53. doi: 10.1016/j.jviromet.2014.02.020. Epub 2014 Mar 2.

19.

Use of droplet digital PCR for estimation of fish abundance and biomass in environmental DNA surveys.

Doi H, Uchii K, Takahara T, Matsuhashi S, Yamanaka H, Minamoto T.

PLoS One. 2015 Mar 23;10(3):e0122763. doi: 10.1371/journal.pone.0122763. eCollection 2015.

20.

Comparison of droplet digital PCR and quantitative PCR for the detection of Salmonella and its application for river sediments.

Singh G, Sithebe A, Enitan AM, Kumari S, Bux F, Stenström TA.

J Water Health. 2017 Aug;15(4):505-508. doi: 10.2166/wh.2017.259.

PMID:
28771147

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