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Items: 1 to 20 of 78

1.

High-Throughput Microdissection for Next-Generation Sequencing.

Rosenberg AZ, Armani MD, Fetsch PA, Xi L, Pham TT, Raffeld M, Chen Y, O'Flaherty N, Stussman R, Blackler AR, Du Q, Hanson JC, Roth MJ, Filie AC, Roh MH, Emmert-Buck MR, Hipp JD, Tangrea MA.

PLoS One. 2016 Mar 21;11(3):e0151775. doi: 10.1371/journal.pone.0151775. eCollection 2016.

2.

Proteomic analysis of nuclei dissected from fixed rat brain tissue using expression microdissection.

Blackler AR, Morgan NY, Gao B, Olano LR, Armani MD, Romantseva E, Kakareka JW, Bonner RF, Mukherjee S, Xiao B, Tran K, Pohida TJ, Emmert-Buck MR, Tangrea MA, Markey SP.

Anal Chem. 2013 Aug 6;85(15):7139-45. doi: 10.1021/ac400691k. Epub 2013 Jul 19.

3.

Optimized expression-based microdissection of formalin-fixed lung cancer tissue.

Grafen M, Hofmann TR, Scheel AH, Beck J, Emmert A, Küffer S, Danner BC, Schütz E, Büttner R, Ostendorf A, Ströbel P, Bohnenberger H.

Lab Invest. 2017 Jul;97(7):863-872. doi: 10.1038/labinvest.2017.31. Epub 2017 Apr 24.

4.

Expression microdissection adapted to commercial laser dissection instruments.

Hanson JC, Tangrea MA, Kim S, Armani MD, Pohida TJ, Bonner RF, Rodriguez-Canales J, Emmert-Buck MR.

Nat Protoc. 2011 Apr;6(4):457-67. doi: 10.1038/nprot.2010.202. Epub 2011 Mar 18.

6.

Laser-assisted microdissection of membrane-mounted sections following immunohistochemistry and in situ hybridization.

Gjerdrum LM, Hamilton-Dutoit S.

Methods Mol Biol. 2005;293:139-49. Review.

PMID:
16028417
7.

Gene expression profiling of neurochemically defined regions of the human brain by in situ hybridization-guided laser capture microdissection.

Bernard R, Kerman IA, Meng F, Evans SJ, Amrein I, Jones EG, Bunney WE, Akil H, Watson SJ, Thompson RC.

J Neurosci Methods. 2009 Mar 30;178(1):46-54. doi: 10.1016/j.jneumeth.2008.11.012. Epub 2008 Nov 25.

8.

Next-generation sequencing of transcriptomes: a guide to RNA isolation in nonmodel animals.

Gayral P, Weinert L, Chiari Y, Tsagkogeorga G, Ballenghien M, Galtier N.

Mol Ecol Resour. 2011 Jul;11(4):650-61. doi: 10.1111/j.1755-0998.2011.03010.x. Epub 2011 Apr 12.

PMID:
21481219
9.

Evaluation of an integrated clinical workflow for targeted next-generation sequencing of low-quality tumor DNA using a 51-gene enrichment panel.

Choudhary A, Mambo E, Sanford T, Boedigheimer M, Twomey B, Califano J, Hadd A, Oliner KS, Beaudenon S, Latham GJ, Adai AT.

BMC Med Genomics. 2014 Nov 14;7:62. doi: 10.1186/s12920-014-0062-0.

10.

Laser capture microdissection of Drosophila peripheral neurons.

Iyer EP, Cox DN.

J Vis Exp. 2010 May 24;(39). pii: 2016. doi: 10.3791/2016.

12.

New aspects of laser microdissection in research and routine.

Burgemeister R.

J Histochem Cytochem. 2005 Mar;53(3):409-12. Review.

PMID:
15750030
13.

Challenges and opportunities of next-generation sequencing: a cytopathologist's perspective.

Vigliar E, Malapelle U, de Luca C, Bellevicine C, Troncone G.

Cytopathology. 2015 Oct;26(5):271-83. doi: 10.1111/cyt.12265. Review.

PMID:
26399861
14.

Breast cancer proteomics by laser capture microdissection, sample pooling, 54-cm IPG IEF, and differential iodine radioisotope detection.

Neubauer H, Clare SE, Kurek R, Fehm T, Wallwiener D, Sotlar K, Nordheim A, Wozny W, Schwall GP, Poznanović S, Sastri C, Hunzinger C, Stegmann W, Schrattenholz A, Cahill MA.

Electrophoresis. 2006 May;27(9):1840-52.

PMID:
16645950
15.

Development of a next-generation sequencing method for BRCA mutation screening: a comparison between a high-throughput and a benchtop platform.

Chan M, Ji SM, Yeo ZX, Gan L, Yap E, Yap YS, Ng R, Tan PH, Ho GH, Ang P, Lee AS.

J Mol Diagn. 2012 Nov;14(6):602-12. doi: 10.1016/j.jmoldx.2012.06.003. Epub 2012 Aug 22.

PMID:
22921312
16.

Effect of immunohistochemistry on molecular analysis of tissue samples: implications for microdissection technologies.

Tangrea MA, Mukherjee S, Gao B, Markey SP, Du Q, Armani M, Kreitman MS, Rosenberg AM, Wallis BS, Eberle FC, Duncan FC, Hanson JC, Chuaqui RF, Rodriguez-Canales J, Emmert-Buck MR.

J Histochem Cytochem. 2011 Jun;59(6):591-600. doi: 10.1369/0022155411404704. Epub 2011 Mar 23.

17.

Expression microdissection: operator-independent retrieval of cells for molecular profiling.

Tangrea MA, Chuaqui RF, Gillespie JW, Ahram M, Gannot G, Wallis BS, Best CJ, Linehan WM, Liotta LA, Pohida TJ, Bonner RF, Emmert-Buck MR.

Diagn Mol Pathol. 2004 Dec;13(4):207-12.

PMID:
15538110
18.

Use of laser-capture microdissection for the identification of marker genes for the ventromedial hypothalamic nucleus.

Segal JP, Stallings NR, Lee CE, Zhao L, Socci N, Viale A, Harris TM, Soares MB, Childs G, Elmquist JK, Parker KL, Friedman JM.

J Neurosci. 2005 Apr 20;25(16):4181-8.

19.

Laser-assisted microdissection, techniques and applications in pathology (review).

Okuducu AF, Hahne JC, Von Deimling A, Wernert N.

Int J Mol Med. 2005 May;15(5):763-9. Review.

PMID:
15806296
20.

Next-generation sequencing technologies in diagnostic virology.

Barzon L, Lavezzo E, Costanzi G, Franchin E, Toppo S, Palù G.

J Clin Virol. 2013 Oct;58(2):346-50. doi: 10.1016/j.jcv.2013.03.003. Epub 2013 Mar 21. Review.

PMID:
23523339

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