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Items: 1 to 20 of 153

1.

R2d2 Drives Selfish Sweeps in the House Mouse.

Didion JP, Morgan AP, Yadgary L, Bell TA, McMullan RC, Ortiz de Solorzano L, Britton-Davidian J, Bult CJ, Campbell KJ, Castiglia R, Ching YH, Chunco AJ, Crowley JJ, Chesler EJ, Förster DW, French JE, Gabriel SI, Gatti DM, Garland T Jr, Giagia-Athanasopoulou EB, Giménez MD, Grize SA, Gündüz İ, Holmes A, Hauffe HC, Herman JS, Holt JM, Hua K, Jolley WJ, Lindholm AK, López-Fuster MJ, Mitsainas G, da Luz Mathias M, McMillan L, Ramalhinho Mda G, Rehermann B, Rosshart SP, Searle JB, Shiao MS, Solano E, Svenson KL, Thomas-Laemont P, Threadgill DW, Ventura J, Weinstock GM, Pomp D, Churchill GA, Pardo-Manuel de Villena F.

Mol Biol Evol. 2016 Jun;33(6):1381-95. doi: 10.1093/molbev/msw036. Epub 2016 Feb 15.

2.

Diversity Outbred Mice at 21: Maintaining Allelic Variation in the Face of Selection.

Chesler EJ, Gatti DM, Morgan AP, Strobel M, Trepanier L, Oberbeck D, McWeeney S, Hitzemann R, Ferris M, McMullan R, Clayshultle A, Bell TA, Manuel de Villena FP, Churchill GA.

G3 (Bethesda). 2016 Dec 7;6(12):3893-3902. doi: 10.1534/g3.116.035527.

3.

Recent selective sweeps in North American Drosophila melanogaster show signatures of soft sweeps.

Garud NR, Messer PW, Buzbas EO, Petrov DA.

PLoS Genet. 2015 Feb 23;11(2):e1005004. doi: 10.1371/journal.pgen.1005004. eCollection 2015 Feb.

4.

A Coalescent Model for a Sweep of a Unique Standing Variant.

Berg JJ, Coop G.

Genetics. 2015 Oct;201(2):707-25. doi: 10.1534/genetics.115.178962. Epub 2015 Aug 25.

5.

Patterns of neutral diversity under general models of selective sweeps.

Coop G, Ralph P.

Genetics. 2012 Sep;192(1):205-24. doi: 10.1534/genetics.112.141861. Epub 2012 Jun 19.

6.

Soft shoulders ahead: spurious signatures of soft and partial selective sweeps result from linked hard sweeps.

Schrider DR, Mendes FK, Hahn MW, Kern AD.

Genetics. 2015 May;200(1):267-84. doi: 10.1534/genetics.115.174912. Epub 2015 Feb 25.

7.

Soft sweeps: molecular population genetics of adaptation from standing genetic variation.

Hermisson J, Pennings PS.

Genetics. 2005 Apr;169(4):2335-52. Epub 2005 Feb 16.

8.

Recombination Alters the Dynamics of Adaptation on Standing Variation in Laboratory Yeast Populations.

Kosheleva K, Desai MM.

Mol Biol Evol. 2018 Jan 1;35(1):180-201. doi: 10.1093/molbev/msx278.

9.

The Evolutionary Fates of a Large Segmental Duplication in Mouse.

Morgan AP, Holt JM, McMullan RC, Bell TA, Clayshulte AM, Didion JP, Yadgary L, Thybert D, Odom DT, Flicek P, McMillan L, de Villena FP.

Genetics. 2016 Sep;204(1):267-85. doi: 10.1534/genetics.116.191007. Epub 2016 Jul 2.

10.

Multiple Modes of Positive Selection Shaping the Patterns of Incomplete Selective Sweeps over African Populations of Drosophila melanogaster.

Vy HMT, Won YJ, Kim Y.

Mol Biol Evol. 2017 Nov 1;34(11):2792-2807. doi: 10.1093/molbev/msx207.

PMID:
28981697
11.

Allele frequency distribution under recurrent selective sweeps.

Kim Y.

Genetics. 2006 Mar;172(3):1967-78. Epub 2005 Dec 15.

12.

Parallel adaptation: one or many waves of advance of an advantageous allele?

Ralph P, Coop G.

Genetics. 2010 Oct;186(2):647-68. doi: 10.1534/genetics.110.119594. Epub 2010 Jul 26.

13.

Rapid genomic changes in Drosophila melanogaster adapting to desiccation stress in an experimental evolution system.

Kang L, Aggarwal DD, Rashkovetsky E, Korol AB, Michalak P.

BMC Genomics. 2016 Mar 15;17:233. doi: 10.1186/s12864-016-2556-y.

14.

Soft Sweeps Are the Dominant Mode of Adaptation in the Human Genome.

Schrider DR, Kern AD.

Mol Biol Evol. 2017 Aug 1;34(8):1863-1877. doi: 10.1093/molbev/msx154.

15.

Polygenic adaptation: From sweeps to subtle frequency shifts.

Höllinger I, Pennings PS, Hermisson J.

PLoS Genet. 2019 Mar 20;15(3):e1008035. doi: 10.1371/journal.pgen.1008035. eCollection 2019 Mar.

16.

A multi-megabase copy number gain causes maternal transmission ratio distortion on mouse chromosome 2.

Didion JP, Morgan AP, Clayshulte AM, Mcmullan RC, Yadgary L, Petkov PM, Bell TA, Gatti DM, Crowley JJ, Hua K, Aylor DL, Bai L, Calaway M, Chesler EJ, French JE, Geiger TR, Gooch TJ, Garland T Jr, Harrill AH, Hunter K, McMillan L, Holt M, Miller DR, O'Brien DA, Paigen K, Pan W, Rowe LB, Shaw GD, Simecek P, Sullivan PF, Svenson KL, Weinstock GM, Threadgill DW, Pomp D, Churchill GA, Pardo-Manuel de Villena F.

PLoS Genet. 2015 Feb 13;11(2):e1004850. doi: 10.1371/journal.pgen.1004850. eCollection 2015 Feb.

17.

An analysis of signatures of selective sweeps in natural populations of the house mouse.

Ihle S, Ravaoarimanana I, Thomas M, Tautz D.

Mol Biol Evol. 2006 Apr;23(4):790-7. Epub 2006 Jan 18. Erratum in: Mol Biol Evol. 2006 May;23(5):1095.

PMID:
16421176
18.

Selective Sweeps.

Stephan W.

Genetics. 2019 Jan;211(1):5-13. doi: 10.1534/genetics.118.301319. Review.

PMID:
30626638
19.

Genetic architecture and selective sweeps after polygenic adaptation to distant trait optima.

Stetter MG, Thornton K, Ross-Ibarra J.

PLoS Genet. 2018 Nov 19;14(11):e1007794. doi: 10.1371/journal.pgen.1007794. eCollection 2018 Nov.

20.

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