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Virulence genes are a signature of the microbiome in the colorectal tumor microenvironment.

Burns MB, Lynch J, Starr TK, Knights D, Blekhman R.

Genome Med. 2015 Jun 24;7(1):55. doi: 10.1186/s13073-015-0177-8. eCollection 2015.


Interaction between Host MicroRNAs and the Gut Microbiota in Colorectal Cancer.

Yuan C, Burns MB, Subramanian S, Blekhman R.

mSystems. 2018 May 15;3(3). pii: e00205-17. doi: 10.1128/mSystems.00205-17. eCollection 2018 May-Jun.


Colorectal cancer mutational profiles correlate with defined microbial communities in the tumor microenvironment.

Burns MB, Montassier E, Abrahante J, Priya S, Niccum DE, Khoruts A, Starr TK, Knights D, Blekhman R.

PLoS Genet. 2018 Jun 20;14(6):e1007376. doi: 10.1371/journal.pgen.1007376. eCollection 2018 Jun.


The gut microbiome modulates colon tumorigenesis.

Zackular JP, Baxter NT, Iverson KD, Sadler WD, Petrosino JF, Chen GY, Schloss PD.

MBio. 2013 Nov 5;4(6):e00692-13. doi: 10.1128/mBio.00692-13.


Association of Fusobacterium nucleatum with immunity and molecular alterations in colorectal cancer.

Nosho K, Sukawa Y, Adachi Y, Ito M, Mitsuhashi K, Kurihara H, Kanno S, Yamamoto I, Ishigami K, Igarashi H, Maruyama R, Imai K, Yamamoto H, Shinomura Y.

World J Gastroenterol. 2016 Jan 14;22(2):557-66. doi: 10.3748/wjg.v22.i2.557. Review.


Co-occurrence of anaerobic bacteria in colorectal carcinomas.

Warren RL, Freeman DJ, Pleasance S, Watson P, Moore RA, Cochrane K, Allen-Vercoe E, Holt RA.

Microbiome. 2013 May 15;1(1):16. doi: 10.1186/2049-2618-1-16.


Metabolic and Community Synergy of Oral Bacteria in Colorectal Cancer.

Flynn KJ, Baxter NT, Schloss PD.

mSphere. 2016 May 11;1(3). pii: e00102-16. doi: 10.1128/mSphere.00102-16. eCollection 2016 May-Jun. Review.


The Microbiome of Aseptically Collected Human Breast Tissue in Benign and Malignant Disease.

Hieken TJ, Chen J, Hoskin TL, Walther-Antonio M, Johnson S, Ramaker S, Xiao J, Radisky DC, Knutson KL, Kalari KR, Yao JZ, Baddour LM, Chia N, Degnim AC.

Sci Rep. 2016 Aug 3;6:30751. doi: 10.1038/srep30751.


The human skin double-stranded DNA virome: topographical and temporal diversity, genetic enrichment, and dynamic associations with the host microbiome.

Hannigan GD, Meisel JS, Tyldsley AS, Zheng Q, Hodkinson BP, SanMiguel AJ, Minot S, Bushman FD, Grice EA.

MBio. 2015 Oct 20;6(5):e01578-15. doi: 10.1128/mBio.01578-15.


Structure of the gut microbiome following colonization with human feces determines colonic tumor burden.

Baxter NT, Zackular JP, Chen GY, Schloss PD.

Microbiome. 2014 Jun 17;2:20. doi: 10.1186/2049-2618-2-20. eCollection 2014.


Inferring Bacterial Infiltration in Primary Colorectal Tumors From Host Whole Genome Sequencing Data.

Guo M, Xu E, Ai D.

Front Genet. 2019 Mar 15;10:213. doi: 10.3389/fgene.2019.00213. eCollection 2019.


Moderate Exercise Has Limited but Distinguishable Effects on the Mouse Microbiome.

Lamoureux EV, Grandy SA, Langille MGI.

mSystems. 2017 Aug 22;2(4). pii: e00006-17. doi: 10.1128/mSystems.00006-17. eCollection 2017 Jul-Aug.


Gut microbiome compositional and functional differences between tumor and non-tumor adjacent tissues from cohorts from the US and Spain.

Allali I, Delgado S, Marron PI, Astudillo A, Yeh JJ, Ghazal H, Amzazi S, Keku T, Azcarate-Peril MA.

Gut Microbes. 2015;6(3):161-72. doi: 10.1080/19490976.2015.1039223.


Microbiomic differences in tumor and paired-normal tissue in head and neck squamous cell carcinomas.

Wang H, Funchain P, Bebek G, Altemus J, Zhang H, Niazi F, Peterson C, Lee WT, Burkey BB, Eng C.

Genome Med. 2017 Feb 7;9(1):14. doi: 10.1186/s13073-017-0405-5.


Functional Changes in the Gut Microbiome Contribute to Transforming Growth Factor ╬▓-Deficient Colon Cancer.

Daniel SG, Ball CL, Besselsen DG, Doetschman T, Hurwitz BL.

mSystems. 2017 Sep 26;2(5). pii: e00065-17. doi: 10.1128/mSystems.00065-17. eCollection 2017 Sep-Oct.


Fusobacterium nucleatum and T Cells in Colorectal Carcinoma.

Mima K, Sukawa Y, Nishihara R, Qian ZR, Yamauchi M, Inamura K, Kim SA, Masuda A, Nowak JA, Nosho K, Kostic AD, Giannakis M, Watanabe H, Bullman S, Milner DA, Harris CC, Giovannucci E, Garraway LA, Freeman GJ, Dranoff G, Chan AT, Garrett WS, Huttenhower C, Fuchs CS, Ogino S.

JAMA Oncol. 2015 Aug;1(5):653-61. doi: 10.1001/jamaoncol.2015.1377.


Tissue-Associated Bacterial Alterations in Rectal Carcinoma Patients Revealed by 16S rRNA Community Profiling.

Thomas AM, Jesus EC, Lopes A, Aguiar S Jr, Begnami MD, Rocha RM, Carpinetti PA, Camargo AA, Hoffmann C, Freitas HC, Silva IT, Nunes DN, Setubal JC, Dias-Neto E.

Front Cell Infect Microbiol. 2016 Dec 9;6:179. doi: 10.3389/fcimb.2016.00179. eCollection 2016.


The Microbiome of the Prostate Tumor Microenvironment.

Cavarretta I, Ferrarese R, Cazzaniga W, Saita D, Lucian├▓ R, Ceresola ER, Locatelli I, Visconti L, Lavorgna G, Briganti A, Nebuloni M, Doglioni C, Clementi M, Montorsi F, Canducci F, Salonia A.

Eur Urol. 2017 Oct;72(4):625-631. doi: 10.1016/j.eururo.2017.03.029. Epub 2017 Apr 20.


The interrelationships of the gut microbiome and inflammation in colorectal carcinogenesis.

Cho M, Carter J, Harari S, Pei Z.

Clin Lab Med. 2014 Dec;34(4):699-710. doi: 10.1016/j.cll.2014.08.002. Epub 2014 Sep 15. Review.


Gut microbiota, inflammation and colorectal cancer.

Sun J, Kato I.

Genes Dis. 2016 Jun;3(2):130-143. doi: 10.1016/j.gendis.2016.03.004. Epub 2016 Apr 13.

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