Similar articles for PMID: 26121221

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1

DNA with Parallel Strand Orientation: A Nanometer Distance Study with Spin Labels in the Watson-Crick and the Reverse Watson-Crick Double Helix.

Wunnicke D, Ding P, Yang H, Seela F, Steinhoff HJ. Wunnicke D, et al. J Phys Chem B. 2015 Oct 29;119(43):13593-9. doi: 10.1021/acs.jpcb.5b02935. Epub 2015 Jul 10. J Phys Chem B. 2015. PMID: 26121221

2

Site-directed spin-labeling of DNA by the azide-alkyne 'click' reaction: nanometer distance measurements on 7-deaza-2'-deoxyadenosine and 2'-deoxyuridine nitroxide conjugates spatially separated or linked to a 'dA-dT' base pair.

Ding P, Wunnicke D, Steinhoff HJ, Seela F. Ding P, et al. Chemistry. 2010 Dec 27;16(48):14385-96. doi: 10.1002/chem.201001572. Chemistry. 2010. PMID: 21117098

3

Site-directed spin labeling of DNA reveals mismatch-induced nanometer distance changes between flanking nucleotides.

Wunnicke D, Ding P, Seela F, Steinhoff HJ. Wunnicke D, et al. J Phys Chem B. 2012 Apr 12;116(14):4118-23. doi: 10.1021/jp212421c. Epub 2012 Apr 3. J Phys Chem B. 2012. PMID: 22424032

4

Parallel-stranded duplex DNA containing dA.dU base pairs.

Förtsch I, Fritzsche H, Birch-Hirschfeld E, Evertsz E, Klement R, Jovin TM, Zimmer C. Förtsch I, et al. Biopolymers. 1996 Feb;38(2):209-20. doi: 10.1002/(SICI)1097-0282(199602)38:2%3C209::AID-BIP7%3E3.0.CO;2-Z. Biopolymers. 1996. PMID: 8589254

5

Robust silver-mediated imidazolo-dC base pairs in metal DNA: dinuclear silver bridges with exceptional stability in double helices with parallel and antiparallel strand orientation.

Jana SK, Guo X, Mei H, Seela F. Jana SK, et al. Chem Commun (Camb). 2015 Dec 18;51(97):17301-4. doi: 10.1039/c5cc06734k. Chem Commun (Camb). 2015. PMID: 26463426

6

Structure and drug interactions of parallel-stranded DNA studied by infrared spectroscopy and fluorescence.

Fritzsche H, Akhebat A, Taillandier E, Rippe K, Jovin TM. Fritzsche H, et al. Nucleic Acids Res. 1993 Nov 11;21(22):5085-91. doi: 10.1093/nar/21.22.5085. Nucleic Acids Res. 1993. PMID: 7504812 Free PMC article.

7

Conformationally restricted isoindoline-derived spin labels in duplex DNA: distances and rotational flexibility by pulsed electron-electron double resonance spectroscopy.

Gophane DB, Endeward B, Prisner TF, Sigurdsson ST. Gophane DB, et al. Chemistry. 2014 Nov 24;20(48):15913-9. doi: 10.1002/chem.201403726. Epub 2014 Oct 8. Chemistry. 2014. PMID: 25296640

8

A PELDOR-based nanometer distance ruler for oligonucleotides.

Schiemann O, Piton N, Mu Y, Stock G, Engels JW, Prisner TF. Schiemann O, et al. J Am Chem Soc. 2004 May 12;126(18):5722-9. doi: 10.1021/ja0393877. J Am Chem Soc. 2004. PMID: 15125665

9

7-Deaza-2'-deoxyguanosine: Selective Nucleobase Halogenation, Positional Impact of Space-Occupying Substituents, and Stability of DNA with Parallel and Antiparallel Strand Orientation.

Ingale SA, Seela F. Ingale SA, et al. J Org Chem. 2016 Sep 16;81(18):8331-42. doi: 10.1021/acs.joc.6b01498. Epub 2016 Sep 2. J Org Chem. 2016. PMID: 27529562

10

Study of a DNA Duplex by Nuclear Magnetic Resonance and Molecular Dynamics Simulations. Validation of Pulsed Dipolar Electron Paramagnetic Resonance Distance Measurements Using Triarylmethyl-Based Spin Labels.

Lomzov AA, Sviridov EA, Shernuykov AV, Shevelev GY, Pyshnyi DV, Bagryanskaya EG. Lomzov AA, et al. J Phys Chem B. 2016 Jun 16;120(23):5125-33. doi: 10.1021/acs.jpcb.6b03193. Epub 2016 Jun 3. J Phys Chem B. 2016. PMID: 27195671

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