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Items: 1 to 20 of 41

1.

Tle distribution and diversity in metagenomic datasets reveal niche specialization.

Egan F, Reen FJ, O'Gara F.

Environ Microbiol Rep. 2015 Apr;7(2):194-203. doi: 10.1111/1758-2229.12222. Epub 2014 Dec 17.

PMID:
25345349
2.

Distribution and diversity of bacterial secretion systems across metagenomic datasets.

Barret M, Egan F, O'Gara F.

Environ Microbiol Rep. 2013 Feb;5(1):117-26. doi: 10.1111/j.1758-2229.2012.00394.x. Epub 2012 Oct 8.

PMID:
23757140
3.

VgrG, Tae, Tle, and beyond: the versatile arsenal of Type VI secretion effectors.

Durand E, Cambillau C, Cascales E, Journet L.

Trends Microbiol. 2014 Sep;22(9):498-507. doi: 10.1016/j.tim.2014.06.004. Epub 2014 Jul 17. Review.

PMID:
25042941
4.

Type VI secretion system effectors: poisons with a purpose.

Russell AB, Peterson SB, Mougous JD.

Nat Rev Microbiol. 2014 Feb;12(2):137-48. doi: 10.1038/nrmicro3185. Epub 2014 Jan 2. Review.

5.

Diverse type VI secretion phospholipases are functionally plastic antibacterial effectors.

Russell AB, LeRoux M, Hathazi K, Agnello DM, Ishikawa T, Wiggins PA, Wai SN, Mougous JD.

Nature. 2013 Apr 25;496(7446):508-12. doi: 10.1038/nature12074. Epub 2013 Apr 3.

6.
7.

Comparative genomics of type VI secretion systems in strains of Pantoea ananatis from different environments.

Shyntum DY, Venter SN, Moleleki LN, Toth I, Coutinho TA.

BMC Genomics. 2014 Feb 26;15:163. doi: 10.1186/1471-2164-15-163.

8.

A widespread bacterial type VI secretion effector superfamily identified using a heuristic approach.

Russell AB, Singh P, Brittnacher M, Bui NK, Hood RD, Carl MA, Agnello DM, Schwarz S, Goodlett DR, Vollmer W, Mougous JD.

Cell Host Microbe. 2012 May 17;11(5):538-49. doi: 10.1016/j.chom.2012.04.007.

9.

Pseudomonas entomophila and Pseudomonas mendocina: potential models for studying the bacterial type VI secretion system.

Sarris PF, Scoulica EV.

Infect Genet Evol. 2011 Aug;11(6):1352-60. doi: 10.1016/j.meegid.2011.04.029. Epub 2011 May 11.

PMID:
21600307
10.

Modeling microbial communities: current, developing, and future technologies for predicting microbial community interaction.

Larsen P, Hamada Y, Gilbert J.

J Biotechnol. 2012 Jul 31;160(1-2):17-24. doi: 10.1016/j.jbiotec.2012.03.009. Epub 2012 Mar 23. Review.

PMID:
22465599
11.

Composition, function, and regulation of T6SS in Pseudomonas aeruginosa.

Chen L, Zou Y, She P, Wu Y.

Microbiol Res. 2015 Mar;172:19-25. doi: 10.1016/j.micres.2015.01.004. Epub 2015 Jan 7. Review.

12.

Random sampling process leads to overestimation of β-diversity of microbial communities.

Zhou J, Jiang YH, Deng Y, Shi Z, Zhou BY, Xue K, Wu L, He Z, Yang Y.

MBio. 2013 Jun 11;4(3):e00324-13. doi: 10.1128/mBio.00324-13.

13.

Genomic analysis of the type VI secretion systems in Pseudomonas spp.: novel clusters and putative effectors uncovered.

Barret M, Egan F, Fargier E, Morrissey JP, O'Gara F.

Microbiology. 2011 Jun;157(Pt 6):1726-39. doi: 10.1099/mic.0.048645-0. Epub 2011 Apr 7.

PMID:
21474537
14.

Imaging type VI secretion-mediated bacterial killing.

Brunet YR, Espinosa L, Harchouni S, Mignot T, Cascales E.

Cell Rep. 2013 Jan 31;3(1):36-41. doi: 10.1016/j.celrep.2012.11.027. Epub 2013 Jan 3.

15.

Genetic diversity and features analysis of type VI secretion systems loci in avian pathogenic Escherichia coli by wide genomic scanning.

Ma J, Sun M, Bao Y, Pan Z, Zhang W, Lu C, Yao H.

Infect Genet Evol. 2013 Dec;20:454-64. doi: 10.1016/j.meegid.2013.09.031. Epub 2013 Oct 8.

16.

Metagenomics and antibiotics.

Garmendia L, Hernandez A, Sanchez MB, Martinez JL.

Clin Microbiol Infect. 2012 Jul;18 Suppl 4:27-31. doi: 10.1111/j.1469-0691.2012.03868.x. Review.

17.

Metagenomic gene discovery: past, present and future.

Cowan D, Meyer Q, Stafford W, Muyanga S, Cameron R, Wittwer P.

Trends Biotechnol. 2005 Jun;23(6):321-9. Review.

PMID:
15922085
18.

The functional potential of high Arctic permafrost revealed by metagenomic sequencing, qPCR and microarray analyses.

Yergeau E, Hogues H, Whyte LG, Greer CW.

ISME J. 2010 Sep;4(9):1206-14. doi: 10.1038/ismej.2010.41. Epub 2010 Apr 15.

PMID:
20393573
19.

T3SEdb: data warehousing of virulence effectors secreted by the bacterial Type III Secretion System.

Tay DM, Govindarajan KR, Khan AM, Ong TY, Samad HM, Soh WW, Tong M, Zhang F, Tan TW.

BMC Bioinformatics. 2010 Oct 15;11 Suppl 7:S4. doi: 10.1186/1471-2105-11-S7-S4.

20.

Comparative genomic analysis uncovers 3 novel loci encoding type six secretion systems differentially distributed in Salmonella serotypes.

Blondel CJ, Jiménez JC, Contreras I, Santiviago CA.

BMC Genomics. 2009 Aug 4;10:354. doi: 10.1186/1471-2164-10-354.

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