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Items: 1 to 20 of 102

1.

Impact of next generation sequencing techniques in food microbiology.

Mayo B, Rachid CT, Alegría A, Leite AM, Peixoto RS, Delgado S.

Curr Genomics. 2014 Aug;15(4):293-309. doi: 10.2174/1389202915666140616233211.

2.

Next-generation approaches to the microbial ecology of food fermentations.

Bokulich NA, Mills DA.

BMB Rep. 2012 Jul;45(7):377-89.

3.

A Review on the Applications of Next Generation Sequencing Technologies as Applied to Food-Related Microbiome Studies.

Cao Y, Fanning S, Proos S, Jordan K, Srikumar S.

Front Microbiol. 2017 Sep 21;8:1829. doi: 10.3389/fmicb.2017.01829. eCollection 2017. Review.

4.

Sausage fermentation and starter cultures in the era of molecular biology methods.

Franciosa I, Alessandria V, Dolci P, Rantsiou K, Cocolin L.

Int J Food Microbiol. 2018 Aug 20;279:26-32. doi: 10.1016/j.ijfoodmicro.2018.04.038. Epub 2018 Apr 25.

PMID:
29723706
5.

Enhancement of Plant Productivity in the Post-Genomics Era.

Thao NP, Tran LS.

Curr Genomics. 2016 Aug;17(4):295-6. doi: 10.2174/138920291704160607182507.

6.

Next-generation sequencing (NGS) in the microbiological world: How to make the most of your money.

Vincent AT, Derome N, Boyle B, Culley AI, Charette SJ.

J Microbiol Methods. 2017 Jul;138:60-71. doi: 10.1016/j.mimet.2016.02.016. Epub 2016 Mar 16. Review.

PMID:
26995332
7.

Next-generation sequencing (NGS) for assessment of microbial water quality: current progress, challenges, and future opportunities.

Tan B, Ng C, Nshimyimana JP, Loh LL, Gin KY, Thompson JR.

Front Microbiol. 2015 Sep 25;6:1027. doi: 10.3389/fmicb.2015.01027. eCollection 2015. Review.

8.

Microbial sequence typing in the genomic era.

Pérez-Losada M, Arenas M, Castro-Nallar E.

Infect Genet Evol. 2017 Sep 21. pii: S1567-1348(17)30328-3. doi: 10.1016/j.meegid.2017.09.022. [Epub ahead of print]

PMID:
28943406
9.

Genome Sequencing.

Verma M, Kulshrestha S, Puri A.

Methods Mol Biol. 2017;1525:3-33.

PMID:
27896715
10.

Characterization of specific spoilage organisms (SSOs) in vacuum-packed ham by culture-plating techniques and MiSeq next-generation sequencing technologies.

Piotrowska-Cyplik A, Myszka K, Czarny J, Ratajczak K, Kowalski R, Biegańska-Marecik R, Staninska-Pięta J, Nowak J, Cyplik P.

J Sci Food Agric. 2017 Jan;97(2):659-668. doi: 10.1002/jsfa.7785. Epub 2016 Jun 13.

PMID:
27144959
11.

Comparing microarrays and next-generation sequencing technologies for microbial ecology research.

Roh SW, Abell GC, Kim KH, Nam YD, Bae JW.

Trends Biotechnol. 2010 Jun;28(6):291-9. doi: 10.1016/j.tibtech.2010.03.001. Epub 2010 Apr 8. Review.

PMID:
20381183
12.

Software for pre-processing Illumina next-generation sequencing short read sequences.

Chen C, Khaleel SS, Huang H, Wu CH.

Source Code Biol Med. 2014 May 3;9:8. doi: 10.1186/1751-0473-9-8. eCollection 2014.

13.

Culture independent methods to assess the diversity and dynamics of microbiota during food fermentation.

Cocolin L, Alessandria V, Dolci P, Gorra R, Rantsiou K.

Int J Food Microbiol. 2013 Oct 1;167(1):29-43. doi: 10.1016/j.ijfoodmicro.2013.05.008. Epub 2013 May 20. Review.

14.

Insights into the microbial diversity and community dynamics of Chinese traditional fermented foods from using high-throughput sequencing approaches.

He GQ, Liu TJ, Sadiq FA, Gu JS, Zhang GH.

J Zhejiang Univ Sci B. 2017 Apr.;18(4):289-302. doi: 10.1631/jzus.B1600148. Review.

15.

Analysis of plant microbe interactions in the era of next generation sequencing technologies.

Knief C.

Front Plant Sci. 2014 May 21;5:216. doi: 10.3389/fpls.2014.00216. eCollection 2014. Review.

16.

Next-generation sequencing: the future of molecular genetics in poultry production and food safety.

Diaz-Sanchez S, Hanning I, Pendleton S, D'Souza D.

Poult Sci. 2013 Feb;92(2):562-72. doi: 10.3382/ps.2012-02741. Review.

PMID:
23300324
17.

Deciphering Endodontic Microbial Communities by Next-generation Sequencing.

Shin JM, Luo T, Lee KH, Guerreiro D, Botero TM, McDonald NJ, Rickard AH.

J Endod. 2018 Jun 1. pii: S0099-2399(18)30241-3. doi: 10.1016/j.joen.2018.04.003. [Epub ahead of print] Review.

PMID:
29861065
18.

Status and Prospects of Next Generation Sequencing Technologies in Crop Plants.

Sharma TR, Devanna BN, Kiran K, Singh PK, Arora K, Jain P, Tiwari IM, Dubey H, Saklani B, Kumari M, Singh J, Jaswal R, Kapoor R, Pawar DV, Sinha S, Bisht DS, Solanke AU, Mondal TK.

Curr Issues Mol Biol. 2018;27:1-36. doi: 10.21775/cimb.027.001. Epub 2017 Sep 8.

PMID:
28885172
19.

Different next generation sequencing platforms produce different microbial profiles and diversity in cystic fibrosis sputum.

Hahn A, Sanyal A, Perez GF, Colberg-Poley AM, Campos J, Rose MC, Pérez-Losada M.

J Microbiol Methods. 2016 Nov;130:95-99. doi: 10.1016/j.mimet.2016.09.002. Epub 2016 Sep 5.

20.

Recent insights into the tick microbiome gained through next-generation sequencing.

Greay TL, Gofton AW, Paparini A, Ryan UM, Oskam CL, Irwin PJ.

Parasit Vectors. 2018 Jan 4;11(1):12. doi: 10.1186/s13071-017-2550-5. Review.

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