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Items: 1 to 20 of 211

1.

Communities of microbial eukaryotes in the mammalian gut within the context of environmental eukaryotic diversity.

Parfrey LW, Walters WA, Lauber CL, Clemente JC, Berg-Lyons D, Teiling C, Kodira C, Mohiuddin M, Brunelle J, Driscoll M, Fierer N, Gilbert JA, Knight R.

Front Microbiol. 2014 Jun 19;5:298. doi: 10.3389/fmicb.2014.00298. eCollection 2014.

2.

Microbial eukaryotes in the human microbiome: ecology, evolution, and future directions.

Parfrey LW, Walters WA, Knight R.

Front Microbiol. 2011 Jul 11;2:153. doi: 10.3389/fmicb.2011.00153. eCollection 2011.

3.

Mock communities highlight the diversity of host-associated eukaryotes.

Wegener Parfrey L.

Mol Ecol. 2015 Sep;24(17):4337-9. doi: 10.1111/mec.13311.

PMID:
26311623
4.
5.

Ontogenetic Differences in Dietary Fat Influence Microbiota Assembly in the Zebrafish Gut.

Wong S, Stephens WZ, Burns AR, Stagaman K, David LA, Bohannan BJ, Guillemin K, Rawls JF.

MBio. 2015 Sep 29;6(5):e00687-15. doi: 10.1128/mBio.00687-15.

6.

Sympatric chimpanzees and gorillas harbor convergent gut microbial communities.

Moeller AH, Peeters M, Ndjango JB, Li Y, Hahn BH, Ochman H.

Genome Res. 2013 Oct;23(10):1715-20. doi: 10.1101/gr.154773.113. Epub 2013 Jun 26.

7.

Microbial Community Patterns Associated with Automated Teller Machine Keypads in New York City.

Bik HM, Maritz JM, Luong A, Shin H, Dominguez-Bello MG, Carlton JM.

mSphere. 2016 Nov 16;1(6). pii: e00226-16. eCollection 2016 Nov-Dec.

8.

Environmental filtering decreases with fish development for the assembly of gut microbiota.

Yan Q, Li J, Yu Y, Wang J, He Z, Van Nostrand JD, Kempher ML, Wu L, Wang Y, Liao L, Li X, Wu S, Ni J, Wang C, Zhou J.

Environ Microbiol. 2016 Dec;18(12):4739-4754. doi: 10.1111/1462-2920.13365. Epub 2016 Jun 8.

PMID:
27130138
9.

Gut Microbiome of the Canadian Arctic Inuit.

Girard C, Tromas N, Amyot M, Shapiro BJ.

mSphere. 2017 Jan 4;2(1). pii: e00297-16. doi: 10.1128/mSphere.00297-16. eCollection 2017 Jan-Feb.

10.

Assembly of the Caenorhabditis elegans gut microbiota from diverse soil microbial environments.

Berg M, Stenuit B, Ho J, Wang A, Parke C, Knight M, Alvarez-Cohen L, Shapira M.

ISME J. 2016 Aug;10(8):1998-2009. doi: 10.1038/ismej.2015.253. Epub 2016 Jan 22.

11.

The Terrestrial Isopod Microbiome: An All-in-One Toolbox for Animal-Microbe Interactions of Ecological Relevance.

Bouchon D, Zimmer M, Dittmer J.

Front Microbiol. 2016 Sep 23;7:1472. eCollection 2016. Review.

12.

Habitat and indigenous gut microbes contribute to the plasticity of gut microbiome in oriental river prawn during rapid environmental change.

Chen CY, Chen PC, Weng FC, Shaw GT, Wang D.

PLoS One. 2017 Jul 17;12(7):e0181427. doi: 10.1371/journal.pone.0181427. eCollection 2017.

13.

Complex coevolutionary history of symbiotic Bacteroidales bacteria of various protists in the gut of termites.

Noda S, Hongoh Y, Sato T, Ohkuma M.

BMC Evol Biol. 2009 Jul 9;9:158. doi: 10.1186/1471-2148-9-158.

14.

Dispersal limitation promotes the diversification of the mammalian gut microbiota.

Moeller AH, Suzuki TA, Lin D, Lacey EA, Wasser SK, Nachman MW.

Proc Natl Acad Sci U S A. 2017 Dec 26;114(52):13768-13773. doi: 10.1073/pnas.1700122114. Epub 2017 Dec 11.

PMID:
29229828
15.

Dietary effects on human gut microbiome diversity.

Xu Z, Knight R.

Br J Nutr. 2015 Jan;113 Suppl:S1-5. doi: 10.1017/S0007114514004127. Epub 2014 Dec 11. Review.

16.

Differential Ecological Specificity of Protist and Bacterial Microbiomes across a Set of Termite Species.

Waidele L, Korb J, Voolstra CR, Künzel S, Dedeine F, Staubach F.

Front Microbiol. 2017 Dec 19;8:2518. doi: 10.3389/fmicb.2017.02518. eCollection 2017.

17.

The pig gut microbial diversity: Understanding the pig gut microbial ecology through the next generation high throughput sequencing.

Kim HB, Isaacson RE.

Vet Microbiol. 2015 Jun 12;177(3-4):242-51. doi: 10.1016/j.vetmic.2015.03.014. Epub 2015 Mar 23. Review.

PMID:
25843944
18.

Kinship, inbreeding and fine-scale spatial structure influence gut microbiota in a hindgut-fermenting tortoise.

Yuan ML, Dean SH, Longo AV, Rothermel BB, Tuberville TD, Zamudio KR.

Mol Ecol. 2015 May;24(10):2521-36. doi: 10.1111/mec.13169. Epub 2015 Apr 20.

PMID:
25809385
19.

Beyond 16S rRNA Community Profiling: Intra-Species Diversity in the Gut Microbiota.

Ellegaard KM, Engel P.

Front Microbiol. 2016 Sep 21;7:1475. eCollection 2016. Review.

20.

Diet Diversity Is Associated with Beta but not Alpha Diversity of Pika Gut Microbiota.

Li H, Li T, Beasley DE, Heděnec P, Xiao Z, Zhang S, Li J, Lin Q, Li X.

Front Microbiol. 2016 Jul 27;7:1169. doi: 10.3389/fmicb.2016.01169. eCollection 2016.

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