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Items: 1 to 20 of 86

1.

Reassessment of PCR primers targeting 16S rRNA genes of the organohalide-respiring genus Dehalogenimonas.

Chen J, Bowman KS, Rainey FA, Moe WM.

Biodegradation. 2014 Sep;25(5):747-56. doi: 10.1007/s10532-014-9696-z.

PMID:
24989478
2.

Detection and quantification of Dehalogenimonas and "Dehalococcoides" populations via PCR-based protocols targeting 16S rRNA genes.

Yan J, Rash BA, Rainey FA, Moe WM.

Appl Environ Microbiol. 2009 Dec;75(23):7560-4. doi: 10.1128/AEM.01938-09.

3.

Discovery of a trans-dichloroethene-respiring Dehalogenimonas species in the 1,1,2,2-tetrachloroethane-dechlorinating WBC-2 consortium.

Manchester MJ, Hug LA, Zarek M, Zila A, Edwards EA.

Appl Environ Microbiol. 2012 Aug;78(15):5280-7. doi: 10.1128/AEM.00384-12.

4.

Stable Carbon Isotope Fractionation During 1,2-Dichloropropane-to-Propene Transformation by an Enrichment Culture Containing Dehalogenimonas Strains and a dcpA Gene.

Martín-González L, Mortan SH, Rosell M, Parladé E, Martínez-Alonso M, Gaju N, Caminal G, Adrian L, Marco-Urrea E.

Environ Sci Technol. 2015 Jul 21;49(14):8666-74. doi: 10.1021/acs.est.5b00929.

PMID:
26111261
5.

Genus-specific primers targeting the 16S rRNA gene for PCR detection of members of the genus Verrucosispora.

Xie Q, Hong K, Goodfellow M.

Antonie Van Leeuwenhoek. 2011 Jun;100(1):117-28. doi: 10.1007/s10482-011-9571-4.

PMID:
21374042
6.

Dehalogenimonas alkenigignens sp. nov., a chlorinated-alkane-dehalogenating bacterium isolated from groundwater.

Bowman KS, Nobre MF, da Costa MS, Rainey FA, Moe WM.

Int J Syst Evol Microbiol. 2013 Apr;63(Pt 4):1492-8. doi: 10.1099/ijs.0.045054-0.

PMID:
22888191
7.
8.

Rapid detection and identification of the free-living nitrogen fixing genus Azospirillum by 16S rRNA-gene-targeted genus-specific primers.

Lin SY, Shen FT, Young CC.

Antonie Van Leeuwenhoek. 2011 May;99(4):837-44. doi: 10.1007/s10482-011-9558-1.

PMID:
21327476
9.

Quantitative PCR targeting 16S rRNA and reductive dehalogenase genes simultaneously monitors multiple Dehalococcoides strains.

Ritalahti KM, Amos BK, Sung Y, Wu Q, Koenigsberg SS, Löffler FE.

Appl Environ Microbiol. 2006 Apr;72(4):2765-74.

10.

Diversity of dechlorination pathways and organohalide respiring bacteria in chlorobenzene dechlorinating enrichment cultures originating from river sludge.

Vandermeeren P, Herrmann S, Cichocka D, Busschaert P, Lievens B, Richnow HH, Springael D.

Biodegradation. 2014 Sep;25(5):757-76. doi: 10.1007/s10532-014-9697-y.

PMID:
25037978
11.

Natural niche for organohalide-respiring Chloroflexi.

Krzmarzick MJ, Crary BB, Harding JJ, Oyerinde OO, Leri AC, Myneni SC, Novak PJ.

Appl Environ Microbiol. 2012 Jan;78(2):393-401. doi: 10.1128/AEM.06510-11.

12.

Dehalogenimonas lykanthroporepellens gen. nov., sp. nov., a reductively dehalogenating bacterium isolated from chlorinated solvent-contaminated groundwater.

Moe WM, Yan J, Nobre MF, da Costa MS, Rainey FA.

Int J Syst Evol Microbiol. 2009 Nov;59(Pt 11):2692-7. doi: 10.1099/ijs.0.011502-0.

PMID:
19625421
13.

Correlation of Dehalococcoides 16S rRNA and chloroethene-reductive dehalogenase genes with geochemical conditions in chloroethene-contaminated groundwater.

van der Zaan B, Hannes F, Hoekstra N, Rijnaarts H, de Vos WM, Smidt H, Gerritse J.

Appl Environ Microbiol. 2010 Feb;76(3):843-50. doi: 10.1128/AEM.01482-09.

14.

Molecular signatures for members of the genus Dehalococcoides and the class Dehalococcoidia.

Ravinesan DA, Gupta RS.

Int J Syst Evol Microbiol. 2014 Jun;64(Pt 6):2176-81. doi: 10.1099/ijs.0.057919-0.

PMID:
24676731
15.

Dehalogenimonas lykanthroporepellens BL-DC-9T simultaneously transcribes many rdhA genes during organohalide respiration with 1,2-DCA, 1,2-DCP, and 1,2,3-TCP as electron acceptors.

Mukherjee K, Bowman KS, Rainey FA, Siddaramappa S, Challacombe JF, Moe WM.

FEMS Microbiol Lett. 2014 May;354(2):111-8. doi: 10.1111/1574-6968.12434.

16.

Quantitative detection of chloroethene-reductive bacteria Dehalococcoides spp. using alternately binding probe competitive Polymerase Chain Reaction.

Miyata R, Adachi K, Tani H, Kurata S, Nakamura K, Tsuneda S, Sekiguchi Y, Noda N.

Mol Cell Probes. 2010 Jun;24(3):131-7. doi: 10.1016/j.mcp.2009.11.005.

PMID:
19944146
17.

Acinetobacter diversity in environmental samples assessed by 16S rRNA gene PCR-DGGE fingerprinting.

Vanbroekhoven K, Ryngaert A, Wattiau P, Mot R, Springael D.

FEMS Microbiol Ecol. 2004 Oct 1;50(1):37-50. doi: 10.1016/j.femsec.2004.05.007.

19.

Quantitative PCR confirms purity of strain GT, a novel trichloroethene-to-ethene-respiring Dehalococcoides isolate.

Sung Y, Ritalahti KM, Apkarian RP, Löffler FE.

Appl Environ Microbiol. 2006 Mar;72(3):1980-7.

20.

Complete genome sequence of Dehalogenimonas lykanthroporepellens type strain (BL-DC-9(T)) and comparison to "Dehalococcoides" strains.

Siddaramappa S, Challacombe JF, Delano SF, Green LD, Daligault H, Bruce D, Detter C, Tapia R, Han S, Goodwin L, Han J, Woyke T, Pitluck S, Pennacchio L, Nolan M, Land M, Chang YJ, Kyrpides NC, Ovchinnikova G, Hauser L, Lapidus A, Yan J, Bowman KS, da Costa MS, Rainey FA, Moe WM.

Stand Genomic Sci. 2012 May 25;6(2):251-64. doi: 10.4056/sigs.2806097.

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