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Items: 1 to 20 of 102

1.

Structural insights into the stabilization of MALAT1 noncoding RNA by a bipartite triple helix.

Brown JA, Bulkley D, Wang J, Valenstein ML, Yario TA, Steitz TA, Steitz JA.

Nat Struct Mol Biol. 2014 Jul;21(7):633-40. doi: 10.1038/nsmb.2844. Epub 2014 Jun 22.

2.

Formation of triple-helical structures by the 3'-end sequences of MALAT1 and MENβ noncoding RNAs.

Brown JA, Valenstein ML, Yario TA, Tycowski KT, Steitz JA.

Proc Natl Acad Sci U S A. 2012 Nov 20;109(47):19202-7. doi: 10.1073/pnas.1217338109. Epub 2012 Nov 5.

3.

Methyltransferase-like protein 16 binds the 3'-terminal triple helix of MALAT1 long noncoding RNA.

Brown JA, Kinzig CG, DeGregorio SJ, Steitz JA.

Proc Natl Acad Sci U S A. 2016 Dec 6;113(49):14013-14018. Epub 2016 Nov 21.

4.

Hoogsteen-position pyrimidines promote the stability and function of the MALAT1 RNA triple helix.

Brown JA, Kinzig CG, DeGregorio SJ, Steitz JA.

RNA. 2016 May;22(5):743-9. doi: 10.1261/rna.055707.115. Epub 2016 Mar 7.

5.

Poly(A) tail recognition by a viral RNA element through assembly of a triple helix.

Mitton-Fry RM, DeGregorio SJ, Wang J, Steitz TA, Steitz JA.

Science. 2010 Nov 26;330(6008):1244-7. doi: 10.1126/science.1195858.

6.

A triple helix stabilizes the 3' ends of long noncoding RNAs that lack poly(A) tails.

Wilusz JE, JnBaptiste CK, Lu LY, Kuhn CD, Joshua-Tor L, Sharp PA.

Genes Dev. 2012 Nov 1;26(21):2392-407. doi: 10.1101/gad.204438.112. Epub 2012 Oct 16.

7.

Conservation of a triple-helix-forming RNA stability element in noncoding and genomic RNAs of diverse viruses.

Tycowski KT, Shu MD, Borah S, Shi M, Steitz JA.

Cell Rep. 2012 Jul 26;2(1):26-32. doi: 10.1016/j.celrep.2012.05.020. Epub 2012 Jul 5.

8.

microRNA-9 targets the long non-coding RNA MALAT1 for degradation in the nucleus.

Leucci E, Patella F, Waage J, Holmstrøm K, Lindow M, Porse B, Kauppinen S, Lund AH.

Sci Rep. 2013;3:2535. doi: 10.1038/srep02535.

9.

Mutational analysis of a viral RNA element that counteracts rapid RNA decay by interaction with the polyadenylate tail.

Conrad NK, Shu MD, Uyhazi KE, Steitz JA.

Proc Natl Acad Sci U S A. 2007 Jun 19;104(25):10412-7. Epub 2007 Jun 11.

10.

N(6)-Methyladenosine Modification in a Long Noncoding RNA Hairpin Predisposes Its Conformation to Protein Binding.

Zhou KI, Parisien M, Dai Q, Liu N, Diatchenko L, Sachleben JR, Pan T.

J Mol Biol. 2016 Feb 27;428(5 Pt A):822-33. doi: 10.1016/j.jmb.2015.08.021. Epub 2015 Sep 4.

11.

Solution structure and dynamics of the wild-type pseudoknot of human telomerase RNA.

Kim NK, Zhang Q, Zhou J, Theimer CA, Peterson RD, Feigon J.

J Mol Biol. 2008 Dec 31;384(5):1249-61. doi: 10.1016/j.jmb.2008.10.005. Epub 2008 Oct 11.

12.

Myriad Triple-Helix-Forming Structures in the Transposable Element RNAs of Plants and Fungi.

Tycowski KT, Shu MD, Steitz JA.

Cell Rep. 2016 May 10;15(6):1266-76. doi: 10.1016/j.celrep.2016.04.010. Epub 2016 Apr 28.

13.

The emerging role of triple helices in RNA biology.

Conrad NK.

Wiley Interdiscip Rev RNA. 2014 Jan-Feb;5(1):15-29. doi: 10.1002/wrna.1194. Epub 2013 Sep 30. Review.

14.

Natural antisense RNA promotes 3' end processing and maturation of MALAT1 lncRNA.

Zong X, Nakagawa S, Freier SM, Fei J, Ha T, Prasanth SG, Prasanth KV.

Nucleic Acids Res. 2016 Apr 7;44(6):2898-908. doi: 10.1093/nar/gkw047. Epub 2016 Jan 29.

15.

Identification and Characterization of a Class of MALAT1-like Genomic Loci.

Zhang B, Mao YS, Diermeier SD, Novikova IV, Nawrocki EP, Jones TA, Lazar Z, Tung CS, Luo W, Eddy SR, Sanbonmatsu KY, Spector DL.

Cell Rep. 2017 May 23;19(8):1723-1738. doi: 10.1016/j.celrep.2017.05.006.

16.

Long noncoding RNA MALAT1 promotes brain metastasis by inducing epithelial-mesenchymal transition in lung cancer.

Shen L, Chen L, Wang Y, Jiang X, Xia H, Zhuang Z.

J Neurooncol. 2015 Jan;121(1):101-8. doi: 10.1007/s11060-014-1613-0. Epub 2014 Sep 14.

PMID:
25217850
17.

High-resolution structure of a DNA helix forming (C.G)*G base triplets.

Van Meervelt L, Vlieghe D, Dautant A, Gallois B, Précigoux G, Kennard O.

Nature. 1995 Apr 20;374(6524):742-4.

PMID:
7715732
18.

Long noncoding RNAs: Re-writing dogmas of RNA processing and stability.

Wilusz JE.

Biochim Biophys Acta. 2016 Jan;1859(1):128-38. doi: 10.1016/j.bbagrm.2015.06.003. Epub 2015 Jun 11. Review.

19.

NMR structure of stem-loop SL2 of the HIV-1 psi RNA packaging signal reveals a novel A-U-A base-triple platform.

Amarasinghe GK, De Guzman RN, Turner RB, Summers MF.

J Mol Biol. 2000 May 26;299(1):145-56.

PMID:
10860728
20.

Identification of base-triples in RNA using comparative sequence analysis.

Gautheret D, Damberger SH, Gutell RR.

J Mol Biol. 1995 Apr 21;248(1):27-43.

PMID:
7537339

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