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Items: 1 to 20 of 103

1.

Data Pre-Processing for Label-Free Multiple Reaction Monitoring (MRM) Experiments.

Chung LM, Colangelo CM, Zhao H.

Biology (Basel). 2014 Jun 5;3(2):383-402. doi: 10.3390/biology3020383.

2.

Analysis of host-cell proteins in biotherapeutic proteins by comprehensive online two-dimensional liquid chromatography/mass spectrometry.

Doneanu CE, Xenopoulos A, Fadgen K, Murphy J, Skilton SJ, Prentice H, Stapels M, Chen W.

MAbs. 2012 Jan-Feb;4(1):24-44. doi: 10.4161/mabs.4.1.18748.

3.

Using pure protein to build a multiple reaction monitoring mass spectrometry assay for targeted detection and quantitation.

Grote E, Fu Q, Ji W, Liu X, Van Eyk JE.

Methods Mol Biol. 2013;1005:199-213. doi: 10.1007/978-1-62703-386-2_16.

PMID:
23606259
4.

Implementation of a data repository-driven approach for targeted proteomics experiments by multiple reaction monitoring.

Walsh GM, Lin S, Evans DM, Khosrovi-Eghbal A, Beavis RC, Kast J.

J Proteomics. 2009 Jul 21;72(5):838-52. doi: 10.1016/j.jprot.2008.11.015. Epub 2008 Dec 6.

5.

Development of MRM-based assays for the absolute quantitation of plasma proteins.

Kuzyk MA, Parker CE, Domanski D, Borchers CH.

Methods Mol Biol. 2013;1023:53-82. doi: 10.1007/978-1-4614-7209-4_4.

PMID:
23765619
6.

Review of software tools for design and analysis of large scale MRM proteomic datasets.

Colangelo CM, Chung L, Bruce C, Cheung KH.

Methods. 2013 Jun 15;61(3):287-98. doi: 10.1016/j.ymeth.2013.05.004. Epub 2013 May 21. Review.

7.

Correlation between y-type ions observed in ion trap and triple quadrupole mass spectrometers.

Sherwood CA, Eastham A, Lee LW, Risler J, Vitek O, Martin DB.

J Proteome Res. 2009 Sep;8(9):4243-51. doi: 10.1021/pr900298b.

8.

A Targeted MRM Approach for Tempo-Spatial Proteomics Analyses.

Moradian A, Porras-Yakushi TR, Sweredoski MJ, Hess S.

Methods Mol Biol. 2016;1394:75-85. doi: 10.1007/978-1-4939-3341-9_6.

PMID:
26700042
9.

Mining proteomic MS/MS data for MRM transitions.

Chem Mead JA, Bianco L, Bessant C.

Methods Mol Biol. 2010;604:187-99. doi: 10.1007/978-1-60761-444-9_13.

PMID:
20013372
10.

Multiple and Selective Reaction Monitoring Using Triple Quadrupole Mass Spectrometer: Preclinical Large Cohort Analysis.

Fu Q, Chen Z, Zhang S, Parker SJ, Fu Z, Tin A, Liu X, Van Eyk JE.

Methods Mol Biol. 2016;1410:249-64. doi: 10.1007/978-1-4939-3524-6_15.

PMID:
26867749
11.

Isotope coded protein label quantification of serum proteins--comparison with the label-free LC-MS and validation using the MRM approach.

Turtoi A, Mazzucchelli GD, De Pauw E.

Talanta. 2010 Feb 15;80(4):1487-95. doi: 10.1016/j.talanta.2009.07.035. Epub 2009 Jul 25.

PMID:
20082806
12.

MaRiMba: a software application for spectral library-based MRM transition list assembly.

Sherwood CA, Eastham A, Lee LW, Peterson A, Eng JK, Shteynberg D, Mendoza L, Deutsch EW, Risler J, Tasman N, Aebersold R, Lam H, Martin DB.

J Proteome Res. 2009 Oct;8(10):4396-405. doi: 10.1021/pr900010h.

13.

Optimal de novo design of MRM experiments for rapid assay development in targeted proteomics.

Bertsch A, Jung S, Zerck A, Pfeifer N, Nahnsen S, Henneges C, Nordheim A, Kohlbacher O.

J Proteome Res. 2010 May 7;9(5):2696-704. doi: 10.1021/pr1001803.

PMID:
20201589
14.

MRM as a discovery tool?

Rudnick PA.

Proteomics. 2015 Apr;15(7):1194-5. doi: 10.1002/pmic.201500090.

PMID:
25762020
15.

Evaluation of multiple reaction monitoring cubed for the analysis of tachykinin related peptides in rat spinal cord using a hybrid triple quadrupole-linear ion trap mass spectrometer.

Pailleux F, Beaudry F.

J Chromatogr B Analyt Technol Biomed Life Sci. 2014 Feb 1;947-948:164-7. doi: 10.1016/j.jchromb.2013.12.025. Epub 2013 Dec 30.

PMID:
24434561
16.

Detection and quantification of proteins in clinical samples using high resolution mass spectrometry.

Gallien S, Domon B.

Methods. 2015 Jun 15;81:15-23. doi: 10.1016/j.ymeth.2015.03.015. Epub 2015 Apr 2.

PMID:
25843604
17.

Optimization by infusion of multiple reaction monitoring transitions for sensitive quantification of peptides by liquid chromatography/mass spectrometry.

Alghanem B, Nikitin F, Stricker T, Duchoslav E, Luban J, Strambio-De-Castillia C, Muller M, Lisacek F, Varesio E, Hopfgartner G.

Rapid Commun Mass Spectrom. 2017 May 15;31(9):753-761. doi: 10.1002/rcm.7839.

PMID:
28199054
18.

SRM/MRM targeted proteomics as a tool for biomarker validation and absolute quantification in human urine.

Mermelekas G, Vlahou A, Zoidakis J.

Expert Rev Mol Diagn. 2015;15(11):1441-54. doi: 10.1586/14737159.2015.1093937. Epub 2015 Oct 15. Review.

PMID:
26472065
19.

Multiple-reaction monitoring-mass spectrometric assays can accurately measure the relative protein abundance in complex mixtures.

Hoofnagle AN, Becker JO, Oda MN, Cavigiolio G, Mayer P, Vaisar T.

Clin Chem. 2012 Apr;58(4):777-81. doi: 10.1373/clinchem.2011.173856. Epub 2012 Feb 3.

20.

Expediting SRM assay development for large-scale targeted proteomics experiments.

Wu C, Shi T, Brown JN, He J, Gao Y, Fillmore TL, Shukla AK, Moore RJ, Camp DG 2nd, Rodland KD, Qian WJ, Liu T, Smith RD.

J Proteome Res. 2014 Oct 3;13(10):4479-87. doi: 10.1021/pr500500d. Epub 2014 Sep 4.

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