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Items: 1 to 20 of 397

1.

Construction of a SNP-based genetic linkage map in cultivated peanut based on large scale marker development using next-generation double-digest restriction-site-associated DNA sequencing (ddRADseq).

Zhou X, Xia Y, Ren X, Chen Y, Huang L, Huang S, Liao B, Lei Y, Yan L, Jiang H.

BMC Genomics. 2014 May 9;15:351. doi: 10.1186/1471-2164-15-351.

2.

A SSR-based composite genetic linkage map for the cultivated peanut (Arachis hypogaea L.) genome.

Hong Y, Chen X, Liang X, Liu H, Zhou G, Li S, Wen S, Holbrook CC, Guo B.

BMC Plant Biol. 2010 Jan 27;10:17. doi: 10.1186/1471-2229-10-17.

3.

An international reference consensus genetic map with 897 marker loci based on 11 mapping populations for tetraploid groundnut (Arachis hypogaea L.).

Gautami B, Foncéka D, Pandey MK, Moretzsohn MC, Sujay V, Qin H, Hong Y, Faye I, Chen X, BhanuPrakash A, Shah TM, Gowda MV, Nigam SN, Liang X, Hoisington DA, Guo B, Bertioli DJ, Rami JF, Varshney RK.

PLoS One. 2012;7(7):e41213. doi: 10.1371/journal.pone.0041213. Epub 2012 Jul 18.

4.

Comparative mapping in intraspecific populations uncovers a high degree of macrosynteny between A- and B-genome diploid species of peanut.

Guo Y, Khanal S, Tang S, Bowers JE, Heesacker AF, Khalilian N, Nagy ED, Zhang D, Taylor CA, Stalker HT, Ozias-Akins P, Knapp SJ.

BMC Genomics. 2012 Nov 10;13:608. doi: 10.1186/1471-2164-13-608.

5.

An integrated genetic linkage map of cultivated peanut (Arachis hypogaea L.) constructed from two RIL populations.

Qin H, Feng S, Chen C, Guo Y, Knapp S, Culbreath A, He G, Wang ML, Zhang X, Holbrook CC, Ozias-Akins P, Guo B.

Theor Appl Genet. 2012 Mar;124(4):653-64. doi: 10.1007/s00122-011-1737-y. Epub 2011 Nov 10.

PMID:
22072100
6.

In silico polymorphism analysis for the development of simple sequence repeat and transposon markers and construction of linkage map in cultivated peanut.

Shirasawa K, Koilkonda P, Aoki K, Hirakawa H, Tabata S, Watanabe M, Hasegawa M, Kiyoshima H, Suzuki S, Kuwata C, Naito Y, Kuboyama T, Nakaya A, Sasamoto S, Watanabe A, Kato M, Kawashima K, Kishida Y, Kohara M, Kurabayashi A, Takahashi C, Tsuruoka H, Wada T, Isobe S.

BMC Plant Biol. 2012 Jun 6;12:80. doi: 10.1186/1471-2229-12-80.

7.

A high-density genetic map of Arachis duranensis, a diploid ancestor of cultivated peanut.

Nagy ED, Guo Y, Tang S, Bowers JE, Okashah RA, Taylor CA, Zhang D, Khanal S, Heesacker AF, Khalilian N, Farmer AD, Carrasquilla-Garcia N, Penmetsa RV, Cook D, Stalker HT, Nielsen N, Ozias-Akins P, Knapp SJ.

BMC Genomics. 2012 Sep 11;13:469. doi: 10.1186/1471-2164-13-469.

8.

A linkage map for the B-genome of Arachis (Fabaceae) and its synteny to the A-genome.

Moretzsohn MC, Barbosa AV, Alves-Freitas DM, Teixeira C, Leal-Bertioli SC, Guimarães PM, Pereira RW, Lopes CR, Cavallari MM, Valls JF, Bertioli DJ, Gimenes MA.

BMC Plant Biol. 2009 Apr 7;9:40. doi: 10.1186/1471-2229-9-40.

9.

Quantitative trait locus analysis of agronomic and quality-related traits in cultivated peanut (Arachis hypogaea L.).

Huang L, He H, Chen W, Ren X, Chen Y, Zhou X, Xia Y, Wang X, Jiang X, Liao B, Jiang H.

Theor Appl Genet. 2015 Jun;128(6):1103-15. doi: 10.1007/s00122-015-2493-1. Epub 2015 Mar 25.

10.

Genetic diversity of peanut (Arachis hypogaea L.) and its wild relatives based on the analysis of hypervariable regions of the genome.

Moretzsohn Mde C, Hopkins MS, Mitchell SE, Kresovich S, Valls JF, Ferreira ME.

BMC Plant Biol. 2004 Jul 14;4:11.

11.

Molecular marker development from transcript sequences and germplasm evaluation for cultivated peanut (Arachis hypogaea L.).

Peng Z, Gallo M, Tillman BL, Rowland D, Wang J.

Mol Genet Genomics. 2016 Feb;291(1):363-81. doi: 10.1007/s00438-015-1115-6. Epub 2015 Sep 11.

PMID:
26362763
12.

The first SSR-based genetic linkage map for cultivated groundnut (Arachis hypogaea L.).

Varshney RK, Bertioli DJ, Moretzsohn MC, Vadez V, Krishnamurthy L, Aruna R, Nigam SN, Moss BJ, Seetha K, Ravi K, He G, Knapp SJ, Hoisington DA.

Theor Appl Genet. 2009 Feb;118(4):729-39. doi: 10.1007/s00122-008-0933-x. Epub 2008 Dec 2.

PMID:
19048225
13.

Construction of a high-density, high-quality genetic map of cultivated lotus (Nelumbo nucifera) using next-generation sequencing.

Liu Z, Zhu H, Liu Y, Kuang J, Zhou K, Liang F, Liu Z, Wang D, Ke W.

BMC Genomics. 2016 Jun 17;17:466. doi: 10.1186/s12864-016-2781-4.

14.

Genetic mapping of wild introgressions into cultivated peanut: a way toward enlarging the genetic basis of a recent allotetraploid.

Foncéka D, Hodo-Abalo T, Rivallan R, Faye I, Sall MN, Ndoye O, Fávero AP, Bertioli DJ, Glaszmann JC, Courtois B, Rami JF.

BMC Plant Biol. 2009 Aug 3;9:103. doi: 10.1186/1471-2229-9-103.

15.

PeanutDB: an integrated bioinformatics web portal for Arachis hypogaea transcriptomics.

Duan X, Schmidt E, Li P, Lenox D, Liu L, Shu C, Zhang J, Liang C.

BMC Plant Biol. 2012 Jun 19;12:94. doi: 10.1186/1471-2229-12-94.

16.

Construction of a reference genetic linkage map for carnation (Dianthus caryophyllus L.).

Yagi M, Yamamoto T, Isobe S, Hirakawa H, Tabata S, Tanase K, Yamaguchi H, Onozaki T.

BMC Genomics. 2013 Oct 26;14:734. doi: 10.1186/1471-2164-14-734.

17.

High-density genetic map construction and QTLs analysis of grain yield-related traits in sesame (Sesamum indicum L.) based on RAD-Seq techonology.

Wu K, Liu H, Yang M, Tao Y, Ma H, Wu W, Zuo Y, Zhao Y.

BMC Plant Biol. 2014 Oct 10;14:274. doi: 10.1186/s12870-014-0274-7.

18.

Development and characterization of BAC-end sequence derived SSRs, and their incorporation into a new higher density genetic map for cultivated peanut (Arachis hypogaea L.).

Wang H, Penmetsa RV, Yuan M, Gong L, Zhao Y, Guo B, Farmer AD, Rosen BD, Gao J, Isobe S, Bertioli DJ, Varshney RK, Cook DR, He G.

BMC Plant Biol. 2012 Jan 19;12:10. doi: 10.1186/1471-2229-12-10.

19.

Utility of EST-derived SSR in cultivated peanut (Arachis hypogaea L.) and Arachis wild species.

Liang X, Chen X, Hong Y, Liu H, Zhou G, Li S, Guo B.

BMC Plant Biol. 2009 Mar 24;9:35. doi: 10.1186/1471-2229-9-35.

20.

Next-generation transcriptome sequencing, SNP discovery and validation in four market classes of peanut, Arachis hypogaea L.

Chopra R, Burow G, Farmer A, Mudge J, Simpson CE, Wilkins TA, Baring MR, Puppala N, Chamberlin KD, Burow MD.

Mol Genet Genomics. 2015 Jun;290(3):1169-80. doi: 10.1007/s00438-014-0976-4. Epub 2015 Feb 7.

PMID:
25663138

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