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Items: 1 to 20 of 90

1.

Latent phenotypes pervade gene regulatory circuits.

Payne JL, Wagner A.

BMC Syst Biol. 2014 May 30;8:64. doi: 10.1186/1752-0509-8-64.

2.

Phenotypic plasticity can facilitate adaptive evolution in gene regulatory circuits.

Espinosa-Soto C, Martin OC, Wagner A.

BMC Evol Biol. 2011 Jan 6;11:5. doi: 10.1186/1471-2148-11-5.

3.

Constraint and contingency in multifunctional gene regulatory circuits.

Payne JL, Wagner A.

PLoS Comput Biol. 2013;9(6):e1003071. doi: 10.1371/journal.pcbi.1003071. Epub 2013 Jun 6.

4.

Evolvability and robustness in a complex signalling circuit.

Raman K, Wagner A.

Mol Biosyst. 2011 Apr;7(4):1081-92. doi: 10.1039/c0mb00165a. Epub 2011 Jan 11.

PMID:
21225054
5.

The molecular origins of evolutionary innovations.

Wagner A.

Trends Genet. 2011 Oct;27(10):397-410. doi: 10.1016/j.tig.2011.06.002. Epub 2011 Aug 27. Review.

PMID:
21872964
6.

Robustness, evolvability, and the logic of genetic regulation.

Payne JL, Moore JH, Wagner A.

Artif Life. 2014 Winter;20(1):111-26. doi: 10.1162/ARTL_a_00099. Epub 2013 Feb 1.

7.

Genotype networks shed light on evolutionary constraints.

Wagner A.

Trends Ecol Evol. 2011 Nov;26(11):577-84. doi: 10.1016/j.tree.2011.07.001. Epub 2011 Aug 15. Review.

PMID:
21840080
8.
9.

Dynamics of gene circuits shapes evolvability.

Jiménez A, Cotterell J, Munteanu A, Sharpe J.

Proc Natl Acad Sci U S A. 2015 Feb 17;112(7):2103-8. doi: 10.1073/pnas.1411065112. Epub 2015 Feb 2. Erratum in: Proc Natl Acad Sci U S A. 2015 Sep 8;112(36):E5110.

10.

Function does not follow form in gene regulatory circuits.

Payne JL, Wagner A.

Sci Rep. 2015 Aug 20;5:13015. doi: 10.1038/srep13015.

11.

Genotype networks in metabolic reaction spaces.

Samal A, Matias Rodrigues JF, Jost J, Martin OC, Wagner A.

BMC Syst Biol. 2010 Mar 19;4:30. doi: 10.1186/1752-0509-4-30.

12.

Phenotypic robustness can increase phenotypic variability after nongenetic perturbations in gene regulatory circuits.

Espinosa-Soto C, Martin OC, Wagner A.

J Evol Biol. 2011 Jun;24(6):1284-97. doi: 10.1111/j.1420-9101.2011.02261.x. Epub 2011 Mar 28.

13.

Evolutionary plasticity and innovations in complex metabolic reaction networks.

Matias Rodrigues JF, Wagner A.

PLoS Comput Biol. 2009 Dec;5(12):e1000613. doi: 10.1371/journal.pcbi.1000613. Epub 2009 Dec 18.

14.

Effects of recombination on complex regulatory circuits.

Martin OC, Wagner A.

Genetics. 2009 Oct;183(2):673-84, 1SI-8SI. doi: 10.1534/genetics.109.104174. Epub 2009 Aug 3.

15.

Innovation and robustness in complex regulatory gene networks.

Ciliberti S, Martin OC, Wagner A.

Proc Natl Acad Sci U S A. 2007 Aug 21;104(34):13591-6. Epub 2007 Aug 9.

16.

Genotype networks, innovation, and robustness in sulfur metabolism.

Matias Rodrigues JF, Wagner A.

BMC Syst Biol. 2011 Mar 7;5:39. doi: 10.1186/1752-0509-5-39.

17.

Phenotype accessibility and noise in random threshold gene regulatory networks.

Pinho R, Garcia V, Feldman MW.

PLoS One. 2015 Apr 28;10(4):e0119972. doi: 10.1371/journal.pone.0119972. eCollection 2014.

18.
19.

The molecular and mathematical basis of Waddington's epigenetic landscape: a framework for post-Darwinian biology?

Huang S.

Bioessays. 2012 Feb;34(2):149-57. doi: 10.1002/bies.201100031. Epub 2011 Nov 18.

PMID:
22102361
20.

Metabolic constraint-based refinement of transcriptional regulatory networks.

Chandrasekaran S, Price ND.

PLoS Comput Biol. 2013;9(12):e1003370. doi: 10.1371/journal.pcbi.1003370. Epub 2013 Dec 5.

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