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Items: 1 to 20 of 106

1.

Genomic differentiation among two strains of the PS1 clade isolated from geographically separated marine habitats.

Jimenez-Infante F, Ngugi DK, Alam I, Rashid M, Baalawi W, Kamau AA, Bajic VB, Stingl U.

FEMS Microbiol Ecol. 2014 Jul;89(1):181-97. doi: 10.1111/1574-6941.12348. Epub 2014 May 22.

2.

Genome sequence of strain IMCC14465, isolated from the East Sea, belonging to the PS1 clade of Alphaproteobacteria.

Yang SJ, Kang I, Cho JC.

J Bacteriol. 2012 Dec;194(24):6952-3. doi: 10.1128/JB.01888-12.

3.

Genomic characterization of two novel SAR11 isolates from the Red Sea, including the first strain of the SAR11 Ib clade.

Jimenez-Infante F, Ngugi DK, Vinu M, Blom J, Alam I, Bajic VB, Stingl U.

FEMS Microbiol Ecol. 2017 Jul 1;93(7). doi: 10.1093/femsec/fix083.

PMID:
28645159
4.

Comprehensive Genomic Analyses of the OM43 Clade, Including a Novel Species from the Red Sea, Indicate Ecotype Differentiation among Marine Methylotrophs.

Jimenez-Infante F, Ngugi DK, Vinu M, Alam I, Kamau AA, Blom J, Bajic VB, Stingl U.

Appl Environ Microbiol. 2015 Dec 11;82(4):1215-26. doi: 10.1128/AEM.02852-15.

5.

Natural variation in SAR11 marine bacterioplankton genomes inferred from metagenomic data.

Wilhelm LJ, Tripp HJ, Givan SA, Smith DP, Giovannoni SJ.

Biol Direct. 2007 Nov 7;2:27.

6.

Genomes of surface isolates of Alteromonas macleodii: the life of a widespread marine opportunistic copiotroph.

López-Pérez M, Gonzaga A, Martin-Cuadrado AB, Onyshchenko O, Ghavidel A, Ghai R, Rodriguez-Valera F.

Sci Rep. 2012;2:696. Epub 2012 Sep 26.

7.

Abundant proteorhodopsin genes in the North Atlantic Ocean.

Campbell BJ, Waidner LA, Cottrell MT, Kirchman DL.

Environ Microbiol. 2008 Jan;10(1):99-109. doi: 10.1111/j.1462-2920.2007.01436.x.

PMID:
18211270
8.

Single-cell genomics reveal low recombination frequencies in freshwater bacteria of the SAR11 clade.

Zaremba-Niedzwiedzka K, Viklund J, Zhao W, Ast J, Sczyrba A, Woyke T, McMahon K, Bertilsson S, Stepanauskas R, Andersson SG.

Genome Biol. 2013 Nov 28;14(11):R130. doi: 10.1186/gb-2013-14-11-r130.

9.

Improved culturability of SAR11 strains in dilution-to-extinction culturing from the East Sea, West Pacific Ocean.

Song J, Oh HM, Cho JC.

FEMS Microbiol Lett. 2009 Jun;295(2):141-7. doi: 10.1111/j.1574-6968.2009.01623.x. Epub 2009 May 1.

11.

Cultivation of the ubiquitous SAR11 marine bacterioplankton clade.

Rappé MS, Connon SA, Vergin KL, Giovannoni SJ.

Nature. 2002 Aug 8;418(6898):630-3.

PMID:
12167859
12.
13.

High-resolution SAR11 ecotype dynamics at the Bermuda Atlantic Time-series Study site by phylogenetic placement of pyrosequences.

Vergin KL, Beszteri B, Monier A, Thrash JC, Temperton B, Treusch AH, Kilpert F, Worden AZ, Giovannoni SJ.

ISME J. 2013 Jul;7(7):1322-32. doi: 10.1038/ismej.2013.32. Epub 2013 Mar 7.

14.

Single-cell enabled comparative genomics of a deep ocean SAR11 bathytype.

Thrash JC, Temperton B, Swan BK, Landry ZC, Woyke T, DeLong EF, Stepanauskas R, Giovannoni SJ.

ISME J. 2014 Jul;8(7):1440-51. doi: 10.1038/ismej.2013.243. Epub 2014 Jan 23.

15.

Comparative and phylogenomic evidence that the alphaproteobacterium HIMB59 is not a member of the oceanic SAR11 clade.

Viklund J, Martijn J, Ettema TJ, Andersson SG.

PLoS One. 2013 Nov 1;8(11):e78858. doi: 10.1371/journal.pone.0078858. eCollection 2013.

16.

SAR11 clade dominates ocean surface bacterioplankton communities.

Morris RM, Rappé MS, Connon SA, Vergin KL, Siebold WA, Carlson CA, Giovannoni SJ.

Nature. 2002 Dec 19-26;420(6917):806-10.

PMID:
12490947
17.

Nitratireductor indicus sp. nov., isolated from deep-sea water.

Lai Q, Yu Z, Yuan J, Sun F, Shao Z.

Int J Syst Evol Microbiol. 2011 Feb;61(Pt 2):295-8. doi: 10.1099/ijs.0.022962-0. Epub 2010 Mar 12.

PMID:
20228212
18.

Water mass and depth determine the distribution and diversity of Rhodobacterales in an Arctic marine system.

Fu Y, Keats KF, Rivkin RB, Lang AS.

FEMS Microbiol Ecol. 2013 Jun;84(3):564-76. doi: 10.1111/1574-6941.12085. Epub 2013 Feb 27.

19.

Comparative genomics of methylated amine utilization by marine Roseobacter clade bacteria and development of functional gene markers (tmm, gmaS).

Chen Y.

Environ Microbiol. 2012 Sep;14(9):2308-22. doi: 10.1111/j.1462-2920.2012.02765.x. Epub 2012 Apr 28.

PMID:
22540311
20.

Albimonas donghaensis gen. nov., sp. nov., a non-photosynthetic member of the class Alphaproteobacteria isolated from seawater.

Lim JM, Jeon CO, Jang HH, Park DJ, Shin YK, Yeo SH, Kim CJ.

Int J Syst Evol Microbiol. 2008 Jan;58(Pt 1):282-5. doi: 10.1099/ijs.0.65429-0.

PMID:
18175722

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