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Modular analysis of bioinformatics demonstrates a critical role for NF-κB in macrophage activation.

Zhang Y, Wang Y, Lu M, Qiao X, Sun B, Zhang W, Xue D.

Inflammation. 2014 Aug;37(4):1240-53. doi: 10.1007/s10753-014-9851-z.


Gene expression profiling of human alveolar macrophages infected by B. anthracis spores demonstrates TNF-alpha and NF-kappab are key components of the innate immune response to the pathogen.

Dozmorov M, Wu W, Chakrabarty K, Booth JL, Hurst RE, Coggeshall KM, Metcalf JP.

BMC Infect Dis. 2009 Sep 10;9:152. doi: 10.1186/1471-2334-9-152.


Expression of different NF-kappaB pathway genes in dendritic cells (DCs) or macrophages assessed by gene expression profiling.

Baltathakis I, Alcantara O, Boldt DH.

J Cell Biochem. 2001 Aug 1-9;83(2):281-90.


p65 controls NF-κB activity by regulating cellular localization of IκBβ.

Valovka T, Hottiger MO.

Biochem J. 2011 Mar 1;434(2):253-63. doi: 10.1042/BJ20101220.


Identification of key genes and crucial modules associated with coronary artery disease by bioinformatics analysis.

Zhang X, Cheng X, Liu H, Zheng C, Rao K, Fang Y, Zhou H, Xiong S.

Int J Mol Med. 2014 Sep;34(3):863-9. doi: 10.3892/ijmm.2014.1817. Epub 2014 Jun 23.


Database screening of herbal monomers regulating autophagy by constructing a "disease-gene-drug" network.

Hao C, Yang Z, Gao B, Lu M, Meng X, Qiao X, Xue D, Zhang W.

BMC Complement Altern Med. 2014 Dec 4;14:466. doi: 10.1186/1472-6882-14-466.


A TNF-induced gene expression program under oscillatory NF-kappaB control.

Tian B, Nowak DE, Brasier AR.

BMC Genomics. 2005 Sep 28;6:137.


Systems biology approaches identify ATF3 as a negative regulator of Toll-like receptor 4.

Gilchrist M, Thorsson V, Li B, Rust AG, Korb M, Roach JC, Kennedy K, Hai T, Bolouri H, Aderem A.

Nature. 2006 May 11;441(7090):173-8. Erratum in: Nature. 2008 Feb 21;451(7181):1022. Roach, Jared C [added].


Genome-wide mapping of RELA(p65) binding identifies E2F1 as a transcriptional activator recruited by NF-kappaB upon TLR4 activation.

Lim CA, Yao F, Wong JJ, George J, Xu H, Chiu KP, Sung WK, Lipovich L, Vega VB, Chen J, Shahab A, Zhao XD, Hibberd M, Wei CL, Lim B, Ng HH, Ruan Y, Chin KC.

Mol Cell. 2007 Aug 17;27(4):622-35.


LMP1-augmented kappa intron enhancer activity contributes to upregulation expression of Ig kappa light chain via NF-kappaB and AP-1 pathways in nasopharyngeal carcinoma cells.

Liu H, Zheng H, Duan Z, Hu D, Li M, Liu S, Li Z, Deng X, Wang Z, Tang M, Shi Y, Yi W, Cao Y.

Mol Cancer. 2009 Oct 27;8:92. doi: 10.1186/1476-4598-8-92.


Magnolol suppresses NF-kappaB activation and NF-kappaB regulated gene expression through inhibition of IkappaB kinase activation.

Tse AK, Wan CK, Zhu GY, Shen XL, Cheung HY, Yang M, Fong WF.

Mol Immunol. 2007 Apr;44(10):2647-58. Epub 2007 Jan 22.


The nuclear factor kappa B (NF-κB) activation is required for phagocytosis of staphylococcus aureus by RAW 264.7 cells.

Zhu F, Yue W, Wang Y.

Exp Cell Res. 2014 Oct 1;327(2):256-63. doi: 10.1016/j.yexcr.2014.04.018. Epub 2014 May 2.


High expression of RelA/p65 is associated with activation of nuclear factor-kappaB-dependent signaling in pancreatic cancer and marks a patient population with poor prognosis.

Weichert W, Boehm M, Gekeler V, Bahra M, Langrehr J, Neuhaus P, Denkert C, Imre G, Weller C, Hofmann HP, Niesporek S, Jacob J, Dietel M, Scheidereit C, Kristiansen G.

Br J Cancer. 2007 Aug 20;97(4):523-30. Epub 2007 Jul 10.


Interaction of TAFII105 with selected p65/RelA dimers is associated with activation of subset of NF-kappa B genes.

Yamit-Hezi A, Nir S, Wolstein O, Dikstein R.

J Biol Chem. 2000 Jun 16;275(24):18180-7.


TNF-alpha gene expression in macrophages: regulation by NF-kappa B is independent of c-Jun or C/EBP beta.

Liu H, Sidiropoulos P, Song G, Pagliari LJ, Birrer MJ, Stein B, Anrather J, Pope RM.

J Immunol. 2000 Apr 15;164(8):4277-85.


Distribution of NF-kappaB-binding sites across human chromosome 22.

Martone R, Euskirchen G, Bertone P, Hartman S, Royce TE, Luscombe NM, Rinn JL, Nelson FK, Miller P, Gerstein M, Weissman S, Snyder M.

Proc Natl Acad Sci U S A. 2003 Oct 14;100(21):12247-52. Epub 2003 Oct 3.


Differential RelA- and RelB-dependent gene transcription in LTbetaR-stimulated mouse embryonic fibroblasts.

Lovas A, Radke D, Albrecht D, Yilmaz ZB, Möller U, Habenicht AJ, Weih F.

BMC Genomics. 2008 Dec 16;9:606. doi: 10.1186/1471-2164-9-606.

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