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Items: 1 to 20 of 166

1.

Chromera velia, endosymbioses and the rhodoplex hypothesis--plastid evolution in cryptophytes, alveolates, stramenopiles, and haptophytes (CASH lineages).

Petersen J, Ludewig AK, Michael V, Bunk B, Jarek M, Baurain D, Brinkmann H.

Genome Biol Evol. 2014 Mar;6(3):666-84. doi: 10.1093/gbe/evu043.

3.

Phylogenomic evidence for separate acquisition of plastids in cryptophytes, haptophytes, and stramenopiles.

Baurain D, Brinkmann H, Petersen J, Rodríguez-Ezpeleta N, Stechmann A, Demoulin V, Roger AJ, Burger G, Lang BF, Philippe H.

Mol Biol Evol. 2010 Jul;27(7):1698-709. doi: 10.1093/molbev/msq059. Epub 2010 Mar 1.

PMID:
20194427
4.

A common red algal origin of the apicomplexan, dinoflagellate, and heterokont plastids.

Janouskovec J, Horák A, Oborník M, Lukes J, Keeling PJ.

Proc Natl Acad Sci U S A. 2010 Jun 15;107(24):10949-54. doi: 10.1073/pnas.1003335107. Epub 2010 Jun 1.

6.

Ancient recruitment by chromists of green algal genes encoding enzymes for carotenoid biosynthesis.

Frommolt R, Werner S, Paulsen H, Goss R, Wilhelm C, Zauner S, Maier UG, Grossman AR, Bhattacharya D, Lohr M.

Mol Biol Evol. 2008 Dec;25(12):2653-67. doi: 10.1093/molbev/msn206. Epub 2008 Sep 17.

PMID:
18799712
7.

ERAD components in organisms with complex red plastids suggest recruitment of a preexisting protein transport pathway for the periplastid membrane.

Felsner G, Sommer MS, Gruenheit N, Hempel F, Moog D, Zauner S, Martin W, Maier UG.

Genome Biol Evol. 2011;3:140-50. doi: 10.1093/gbe/evq074. Epub 2010 Nov 15.

8.

Updating algal evolutionary relationships through plastid genome sequencing: did alveolate plastids emerge through endosymbiosis of an ochrophyte?

Ševčíková T, Horák A, Klimeš V, Zbránková V, Demir-Hilton E, Sudek S, Jenkins J, Schmutz J, Přibyl P, Fousek J, Vlček Č, Lang BF, Oborník M, Worden AZ, Eliáš M.

Sci Rep. 2015 May 28;5:10134. doi: 10.1038/srep10134.

9.

The evolutionary history of haptophytes and cryptophytes: phylogenomic evidence for separate origins.

Burki F, Okamoto N, Pombert JF, Keeling PJ.

Proc Biol Sci. 2012 Jun 7;279(1736):2246-54. doi: 10.1098/rspb.2011.2301. Epub 2012 Feb 1.

10.

Phylogenomic analysis supports the monophyly of cryptophytes and haptophytes and the association of rhizaria with chromalveolates.

Hackett JD, Yoon HS, Li S, Reyes-Prieto A, Rümmele SE, Bhattacharya D.

Mol Biol Evol. 2007 Aug;24(8):1702-13. Epub 2007 May 7.

PMID:
17488740
11.

Phylogeny of dinoflagellate plastid genes recently transferred to the nucleus supports a common ancestry with red algal plastid genes.

Wang Y, Joly S, Morse D.

J Mol Evol. 2008 Feb;66(2):175-84. doi: 10.1007/s00239-008-9070-z. Epub 2008 Feb 6.

PMID:
18253685
12.

Red and problematic green phylogenetic signals among thousands of nuclear genes from the photosynthetic and apicomplexa-related Chromera velia.

Woehle C, Dagan T, Martin WF, Gould SB.

Genome Biol Evol. 2011;3:1220-30. doi: 10.1093/gbe/evr100. Epub 2011 Sep 28. Erratum in: Genome Biol Evol. 2012 Jan;4(4):617.

13.

Phylogenetic Analysis of Nucleus-Encoded Acetyl-CoA Carboxylases Targeted at the Cytosol and Plastid of Algae.

Huerlimann R, Zenger KR, Jerry DR, Heimann K.

PLoS One. 2015 Jul 1;10(7):e0131099. doi: 10.1371/journal.pone.0131099. eCollection 2015.

14.

Chromalveolates and the evolution of plastids by secondary endosymbiosis.

Keeling PJ.

J Eukaryot Microbiol. 2009 Jan-Feb;56(1):1-8. doi: 10.1111/j.1550-7408.2008.00371.x. Review.

PMID:
19335769
15.
16.

Re-evaluating the green versus red signal in eukaryotes with secondary plastid of red algal origin.

Burki F, Flegontov P, Oborník M, Cihlár J, Pain A, Lukes J, Keeling PJ.

Genome Biol Evol. 2012;4(6):626-35. doi: 10.1093/gbe/evs049. Epub 2012 May 16.

17.

Plastid genome sequence of the cryptophyte alga Rhodomonas salina CCMP1319: lateral transfer of putative DNA replication machinery and a test of chromist plastid phylogeny.

Khan H, Parks N, Kozera C, Curtis BA, Parsons BJ, Bowman S, Archibald JM.

Mol Biol Evol. 2007 Aug;24(8):1832-42. Epub 2007 May 23.

PMID:
17522086
18.

Chlorophyll c-containing plastid relationships based on analyses of a multigene data set with all four chromalveolate lineages.

Bachvaroff TR, Sanchez Puerta MV, Delwiche CF.

Mol Biol Evol. 2005 Sep;22(9):1772-82. Epub 2005 May 25.

PMID:
15917498
19.

After the primary endosymbiosis: an update on the chromalveolate hypothesis and the origins of algae with Chl c.

Green BR.

Photosynth Res. 2011 Jan;107(1):103-15. doi: 10.1007/s11120-010-9584-2. Epub 2010 Jul 30. Review.

PMID:
20676772
20.

A phylogenetic mosaic plastid proteome and unusual plastid-targeting signals in the green-colored dinoflagellate Lepidodinium chlorophorum.

Minge MA, Shalchian-Tabrizi K, Tørresen OK, Takishita K, Probert I, Inagaki Y, Klaveness D, Jakobsen KS.

BMC Evol Biol. 2010 Jun 21;10:191. doi: 10.1186/1471-2148-10-191.

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