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Items: 1 to 20 of 83

1.

TcaR-ssDNA complex crystal structure reveals new DNA binding mechanism of the MarR family proteins.

Chang YM, Ho CH, Chen CK, Maestre-Reyna M, Chang-Chien MW, Wang AH.

Nucleic Acids Res. 2014 Apr;42(8):5314-21. doi: 10.1093/nar/gku128. Epub 2014 Feb 14.

2.

Functional studies of ssDNA binding ability of MarR family protein TcaR from Staphylococcus epidermidis.

Chang YM, Chen CK, Chang YC, Jeng WY, Hou MH, Wang AH.

PLoS One. 2012;7(9):e45665. doi: 10.1371/journal.pone.0045665. Epub 2012 Sep 21.

3.

Structural study of TcaR and its complexes with multiple antibiotics from Staphylococcus epidermidis.

Chang YM, Jeng WY, Ko TP, Yeh YJ, Chen CK, Wang AH.

Proc Natl Acad Sci U S A. 2010 May 11;107(19):8617-22. doi: 10.1073/pnas.0913302107. Epub 2010 Apr 26.

5.

The structure of DdrB from Deinococcus: a new fold for single-stranded DNA binding proteins.

Sugiman-Marangos S, Junop MS.

Nucleic Acids Res. 2010 Jun;38(10):3432-40. doi: 10.1093/nar/gkq036. Epub 2010 Feb 2.

6.

Structural analysis of the antibiotic-recognition mechanism of MarR proteins.

Chang YM, Chen CK, Ko TP, Chang-Chien MW, Wang AH.

Acta Crystallogr D Biol Crystallogr. 2013 Jun;69(Pt 6):1138-49. doi: 10.1107/S0907444913007117. Epub 2013 May 16.

PMID:
23695258
7.

Single-stranded DNA-binding protein complex from Helicobacter pylori suggests an ssDNA-binding surface.

Chan KW, Lee YJ, Wang CH, Huang H, Sun YJ.

J Mol Biol. 2009 May 8;388(3):508-19. doi: 10.1016/j.jmb.2009.03.022. Epub 2009 Mar 13.

PMID:
19285993
8.

Complexed crystal structure of replication restart primosome protein PriB reveals a novel single-stranded DNA-binding mode.

Huang CY, Hsu CH, Sun YJ, Wu HN, Hsiao CD.

Nucleic Acids Res. 2006;34(14):3878-86. Epub 2006 Aug 9.

9.

The crystal structure of a replicative hexameric helicase DnaC and its complex with single-stranded DNA.

Lo YH, Tsai KL, Sun YJ, Chen WT, Huang CY, Hsiao CD.

Nucleic Acids Res. 2009 Feb;37(3):804-14. doi: 10.1093/nar/gkn999. Epub 2008 Dec 15.

10.

EMSA and single-molecule force spectroscopy study of interactions between Bacillus subtilis single-stranded DNA-binding protein and single-stranded DNA.

Zhang W, Lü X, Zhang W, Shen J.

Langmuir. 2011 Dec 20;27(24):15008-15. doi: 10.1021/la203752y. Epub 2011 Nov 22.

PMID:
22054219
11.

Crystal structure of human mitochondrial single-stranded DNA binding protein at 2.4 A resolution.

Yang C, Curth U, Urbanke C, Kang C.

Nat Struct Biol. 1997 Feb;4(2):153-7.

PMID:
9033597
13.

Crystal structures of Y41H and Y41F mutants of gene V protein from Ff phage suggest possible protein-protein interactions in the GVP-ssDNA complex.

Guan Y, Zhang H, Konings RN, Hilbers CW, Terwilliger TC, Wang AH.

Biochemistry. 1994 Jun 28;33(25):7768-78.

PMID:
8011642
14.

DnaT is a single-stranded DNA binding protein.

Huang YH, Lin MJ, Huang CY.

Genes Cells. 2013 Nov;18(11):1007-19. doi: 10.1111/gtc.12095. Epub 2013 Oct 7.

15.

HU binds and folds single-stranded DNA.

Kamashev D, Balandina A, Mazur AK, Arimondo PB, Rouviere-Yaniv J.

Nucleic Acids Res. 2008 Feb;36(3):1026-36. Epub 2007 Dec 20.

16.

Studying the recognition mechanism of TcaR and ssDNA using molecular dynamic simulations.

Fan JR, Zhang HX, Mu YG, Zheng QC.

J Mol Graph Model. 2018 Mar;80:67-75. doi: 10.1016/j.jmgm.2017.12.001. Epub 2017 Dec 5.

PMID:
29324326
17.

The crystal structure of MarR, a regulator of multiple antibiotic resistance, at 2.3 A resolution.

Alekshun MN, Levy SB, Mealy TR, Seaton BA, Head JF.

Nat Struct Biol. 2001 Aug;8(8):710-4.

PMID:
11473263
18.

MALDI-MS detection of noncovalent interactions of single stranded DNA with Escherichia coli single-stranded DNA-binding protein.

Chen F, Mädler S, Weidmann S, Zenobi R.

J Mass Spectrom. 2012 May;47(5):560-6. doi: 10.1002/jms.2989.

PMID:
22549990
19.

Interaction of UvrA and UvrB proteins with a fluorescent single-stranded DNA. Implication for slow conformational change upon interaction of UvrB with DNA.

Yamagata A, Masui R, Kato R, Nakagawa N, Ozaki H, Sawai H, Kuramitsu S, Fukuyama K.

J Biol Chem. 2000 May 5;275(18):13235-42.

20.

Crystal structure of DnaT84-153-dT10 ssDNA complex reveals a novel single-stranded DNA binding mode.

Liu Z, Chen P, Wang X, Cai G, Niu L, Teng M, Li X.

Nucleic Acids Res. 2014 Aug;42(14):9470-83. doi: 10.1093/nar/gku633. Epub 2014 Jul 22.

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