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Items: 1 to 20 of 171

1.

PLP undergoes conformational changes during the course of an enzymatic reaction.

Ngo HP, Cerqueira NM, Kim JK, Hong MK, Fernandes PA, Ramos MJ, Kang LW.

Acta Crystallogr D Biol Crystallogr. 2014 Feb;70(Pt 2):596-606. doi: 10.1107/S1399004713031283.

PMID:
24531493
2.

A catalytic mechanism that explains a low catalytic activity of serine dehydratase like-1 from human cancer cells: crystal structure and site-directed mutagenesis studies.

Yamada T, Komoto J, Kasuya T, Takata Y, Ogawa H, Mori H, Takusagawa F.

Biochim Biophys Acta. 2008 May;1780(5):809-18. doi: 10.1016/j.bbagen.2008.01.020.

PMID:
18342636
3.

Crystal structure of serine dehydratase from rat liver.

Yamada T, Komoto J, Takata Y, Ogawa H, Pitot HC, Takusagawa F.

Biochemistry. 2003 Nov 11;42(44):12854-65.

PMID:
14596599
4.
5.

Crystal structure of the pyridoxal-5'-phosphate-dependent serine dehydratase from human liver.

Sun L, Bartlam M, Liu Y, Pang H, Rao Z.

Protein Sci. 2005 Mar;14(3):791-8.

6.

Crystal structure and characterization of a novel L-serine ammonia-lyase from Rhizomucor miehei.

Qin Z, Yan Q, Ma Q, Jiang Z.

Biochem Biophys Res Commun. 2015 Oct 23;466(3):431-7. doi: 10.1016/j.bbrc.2015.09.043.

PMID:
26367174
7.

Conformational transitions driven by pyridoxal-5'-phosphate uptake in the psychrophilic serine hydroxymethyltransferase from Psychromonas ingrahamii.

Angelaccio S, Dworkowski F, Di Bello A, Milano T, Capitani G, Pascarella S.

Proteins. 2014 Oct;82(10):2831-41. doi: 10.1002/prot.24646.

PMID:
25044250
8.

The crystal structure of D-threonine aldolase from Alcaligenes xylosoxidans provides insight into a metal ion assisted PLP-dependent mechanism.

Uhl MK, Oberdorfer G, Steinkellner G, Riegler-Berket L, Mink D, van Assema F, Schürmann M, Gruber K.

PLoS One. 2015 Apr 17;10(4):e0124056. doi: 10.1371/journal.pone.0124056.

9.

Pyridoxal-5'-phosphate-dependent catalytic antibodies.

Gramatikova S, Mouratou B, Stetefeld J, Mehta PK, Christen P.

J Immunol Methods. 2002 Nov 1;269(1-2):99-110. Review.

PMID:
12379355
10.

Pyridoxal-5'-phosphate-dependent catalytic antibodies.

Gramatikova SI, Christen P.

Appl Biochem Biotechnol. 2000 Jan-Mar;83(1-3):183-90; discussion 190-3, 297-313.

PMID:
10826959
12.

Molecular evolution of B6 enzymes: binding of pyridoxal-5'-phosphate and Lys41Arg substitution turn ribonuclease A into a model B6 protoenzyme.

Vacca RA, Giannattasio S, Capitani G, Marra E, Christen P.

BMC Biochem. 2008 Jun 19;9:17. doi: 10.1186/1471-2091-9-17.

13.

Reaction mechanism of Zn2+-dependent d-serine dehydratase: role of a conserved tyrosine residue interacting with pyridine ring nitrogen of pyridoxal 5'-phosphate.

Ito T, Matsuoka M, Koga K, Hemmi H, Yoshimura T.

J Biochem. 2014 Sep;156(3):173-80. doi: 10.1093/jb/mvu035.

PMID:
24881047
14.

Crystal structure of D-serine dehydratase from Escherichia coli.

Urusova DV, Isupov MN, Antonyuk S, Kachalova GS, Obmolova G, Vagin AA, Lebedev AA, Burenkov GP, Dauter Z, Bartunik HD, Lamzin VS, Melik-Adamyan WR, Mueller TD, Schnackerz KD.

Biochim Biophys Acta. 2012 Mar;1824(3):422-32. doi: 10.1016/j.bbapap.2011.10.017.

PMID:
22197591
15.

Stereospecificity for the hydrogen transfer and molecular evolution of pyridoxal enzymes.

Yoshimura T, Jhee KH, Soda K.

Biosci Biotechnol Biochem. 1996 Feb;60(2):181-7. Review.

16.

Role of Lys-226 in the catalytic mechanism of Bacillus stearothermophilus serine hydroxymethyltransferase--crystal structure and kinetic studies.

Bhavani S, Trivedi V, Jala VR, Subramanya HS, Kaul P, Prakash V, Appaji Rao N, Savithri HS.

Biochemistry. 2005 May 10;44(18):6929-37.

PMID:
15865438
17.

Crystal structures capture three states in the catalytic cycle of a pyridoxal phosphate (PLP) synthase.

Smith AM, Brown WC, Harms E, Smith JL.

J Biol Chem. 2015 Feb 27;290(9):5226-39. doi: 10.1074/jbc.M114.626382.

18.

Mechanism of substrate recognition and PLP-induced conformational changes in LL-diaminopimelate aminotransferase from Arabidopsis thaliana.

Watanabe N, Clay MD, van Belkum MJ, Cherney MM, Vederas JC, James MN.

J Mol Biol. 2008 Dec 31;384(5):1314-29. doi: 10.1016/j.jmb.2008.10.022.

PMID:
18952095
19.

Pyridoxal 5'-phosphate-dependent catalytic antibody.

Gramatikova SI, Christen P.

J Biol Chem. 1996 Nov 29;271(48):30583-6.

20.

Structure of Escherichia coli tryptophanase.

Ku SY, Yip P, Howell PL.

Acta Crystallogr D Biol Crystallogr. 2006 Jul;62(Pt 7):814-23.

PMID:
16790938
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