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Items: 1 to 20 of 143

1.

Metaproteomics of soils from semiarid environment: functional and phylogenetic information obtained with different protein extraction methods.

Bastida F, Hernández T, García C.

J Proteomics. 2014 Apr 14;101:31-42. doi: 10.1016/j.jprot.2014.02.006. Epub 2014 Feb 12.

PMID:
24530626
2.

Microbial protein in soil: influence of extraction method and C amendment on extraction and recovery.

Taylor EB, Williams MA.

Microb Ecol. 2010 Feb;59(2):390-9. doi: 10.1007/s00248-009-9593-x. Epub 2009 Oct 21.

PMID:
19844650
3.

Amino acid treatment enhances protein recovery from sediment and soils for metaproteomic studies.

Nicora CD, Anderson BJ, Callister SJ, Norbeck AD, Purvine SO, Jansson JK, Mason OU, David MM, Jurelevicius D, Smith RD, Lipton MS.

Proteomics. 2013 Oct;13(18-19):2776-85. doi: 10.1002/pmic.201300003. Epub 2013 Aug 16.

PMID:
23776032
4.

A sequential co-extraction method for DNA, RNA and protein recovery from soil for future system-based approaches.

Gunnigle E, Ramond JB, Frossard A, Seeley M, Cowan D.

J Microbiol Methods. 2014 Aug;103:118-23. doi: 10.1016/j.mimet.2014.06.004. Epub 2014 Jun 11.

PMID:
24929037
5.

[Applications of soil metaproteomics in soil pollution assessment: a review].

Zhang X, Li F, Liu TT, Chen YX.

Ying Yong Sheng Tai Xue Bao. 2012 Oct;23(10):2923-30. Review. Chinese.

PMID:
23359959
6.

Direct cellular lysis/protein extraction protocol for soil metaproteomics.

Chourey K, Jansson J, VerBerkmoes N, Shah M, Chavarria KL, Tom LM, Brodie EL, Hettich RL.

J Proteome Res. 2010 Dec 3;9(12):6615-22. doi: 10.1021/pr100787q. Epub 2010 Nov 15.

PMID:
20954746
7.

Diversity and activity of denitrifiers of chilean arid soil ecosystems.

Orlando J, Carú M, Pommerenke B, Braker G.

Front Microbiol. 2012 Apr 5;3:101. doi: 10.3389/fmicb.2012.00101. eCollection 2012.

8.

Toxicity bioassays for ecological risk assessment in arid and semiarid ecosystems.

Markwiese JT, Ryti RT, Hooten MM, Michael DI, Hlohowskyj I.

Rev Environ Contam Toxicol. 2001;168:43-98. Review.

PMID:
12882227
9.

Water pulses and biogeochemical cycles in arid and semiarid ecosystems.

Austin AT, Yahdjian L, Stark JM, Belnap J, Porporato A, Norton U, Ravetta DA, Schaeffer SM.

Oecologia. 2004 Oct;141(2):221-35. Epub 2004 Feb 24. Review.

PMID:
14986096
10.

Carbon/nitrogen ratio as a major factor for predicting the effects of organic wastes on soil bacterial communities assessed by DNA-based molecular techniques.

Ge Y, Chen C, Xu Z, Eldridge SM, Chan KY, He Y, He JZ.

Environ Sci Pollut Res Int. 2010 Mar;17(3):807-15. doi: 10.1007/s11356-009-0185-6. Epub 2009 Jun 5.

PMID:
19499260
11.

Characterization of metaproteomics in crop rhizospheric soil.

Wang HB, Zhang ZX, Li H, He HB, Fang CX, Zhang AJ, Li QS, Chen RS, Guo XK, Lin HF, Wu LK, Lin S, Chen T, Lin RY, Peng XX, Lin WX.

J Proteome Res. 2011 Mar 4;10(3):932-40. doi: 10.1021/pr100981r. Epub 2011 Jan 18.

PMID:
21142081
12.

Soil microbial diversity in the vicinity of desert shrubs.

Saul-Tcherkas V, Unc A, Steinberger Y.

Microb Ecol. 2013 Apr;65(3):689-99. doi: 10.1007/s00248-012-0141-8. Epub 2012 Nov 29.

PMID:
23192699
13.

Functional metaproteome analysis of protein extracts from contaminated soil and groundwater.

Benndorf D, Balcke GU, Harms H, von Bergen M.

ISME J. 2007 Jul;1(3):224-34. Epub 2007 May 31.

PMID:
18043633
14.

Determination of low bacterial concentrations in hyperarid Atacama soils: comparison of biochemical and microscopy methods with real-time quantitative PCR.

Fletcher LE, Conley CA, Valdivia-Silva JE, Perez-Montaño S, Condori-Apaza R, Kovacs GT, Glavin DP, McKay CP.

Can J Microbiol. 2011 Nov;57(11):953-63. doi: 10.1139/w11-091.

PMID:
22035208
15.

Land reclamation and short-term cultivation change soil microbial communities and bacterial metabolic profiles.

He XY, Su YR, Liang YM, Chen XB, Zhu HH, Wang KL.

J Sci Food Agric. 2012 Mar 30;92(5):1103-11. doi: 10.1002/jsfa.5547. Epub 2012 Jan 6.

PMID:
22227863
16.

Spatial and temporal biogeography of soil microbial communities in arid and semiarid regions.

Pasternak Z, Al-Ashhab A, Gatica J, Gafny R, Avraham S, Minz D, Gillor O, Jurkevitch E.

PLoS One. 2013 Jul 26;8(7):e69705. doi: 10.1371/journal.pone.0069705. Print 2013.

17.

Watering, fertilization, and slurry inoculation promote recovery of biological crust function in degraded soils.

Maestre FT, Martín N, Díez B, López-Poma R, Santos F, Luque I, Cortina J.

Microb Ecol. 2006 Oct;52(3):365-77. Epub 2006 May 19.

PMID:
16710791
18.

Soil microbial responses to temporal variations of moisture and temperature in a chihuahuan desert grassland.

Bell C, McIntyre N, Cox S, Tissue D, Zak J.

Microb Ecol. 2008 Jul;56(1):153-67. doi: 10.1007/s00248-007-9333-z. Epub 2008 Feb 2.

PMID:
18246293
19.

Restoring biochemical activity and bacterial diversity in a trichloroethylene-contaminated soil: the reclamation effect of vermicomposted olive wastes.

Moreno B, Vivas A, Nogales R, Macci C, Masciandaro G, Benitez E.

Environ Sci Pollut Res Int. 2009 May;16(3):253-64. doi: 10.1007/s11356-008-0035-y. Epub 2008 Aug 27.

PMID:
18751749
20.

The soil carbon/nitrogen ratio and moisture affect microbial community structures in alkaline permafrost-affected soils with different vegetation types on the Tibetan plateau.

Zhang X, Xu S, Li C, Zhao L, Feng H, Yue G, Ren Z, Cheng G.

Res Microbiol. 2014 Feb-Mar;165(2):128-39. doi: 10.1016/j.resmic.2014.01.002. Epub 2014 Jan 23.

PMID:
24463013

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