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Items: 1 to 20 of 100

1.

Proteomic profiling of cardiac tissue by isolation of nuclei tagged in specific cell types (INTACT).

Amin NM, Greco TM, Kuchenbrod LM, Rigney MM, Chung MI, Wallingford JB, Cristea IM, Conlon FL.

Development. 2014 Feb;141(4):962-73. doi: 10.1242/dev.098327.

2.

Epigenome profiling of specific plant cell types using a streamlined INTACT protocol and ChIP-seq.

Wang D, Deal RB.

Methods Mol Biol. 2015;1284:3-25. doi: 10.1007/978-1-4939-2444-8_1.

PMID:
25757765
3.

The INTACT method for cell type-specific gene expression and chromatin profiling in Arabidopsis thaliana.

Deal RB, Henikoff S.

Nat Protoc. 2011 Jan;6(1):56-68. doi: 10.1038/nprot.2010.175. Epub 2010 Dec 16.

PMID:
21212783
4.

Isolation, Proteomic Analysis, and Microscopy Confirmation of the Liver Nuclear Envelope Proteome.

Korfali N, Florens L, Schirmer EC.

Methods Mol Biol. 2016;1411:3-44. doi: 10.1007/978-1-4939-3530-7_1.

PMID:
27147032
5.

Purification of nuclei and preparation of nuclear envelopes from skeletal muscle.

Wilkie GS, Schirmer EC.

Methods Mol Biol. 2008;463:23-41. doi: 10.1007/978-1-59745-406-3_2.

PMID:
18951158
6.

Cell type-specific affinity purification of nuclei for chromatin profiling in whole animals.

Steiner FA, Henikoff S.

Methods Mol Biol. 2015;1228:3-14. doi: 10.1007/978-1-4939-1680-1_1.

PMID:
25311117
7.

Biochemical isolation of myonuclei employed to define changes to the myonuclear proteome that occur with aging.

Cutler AA, Dammer EB, Doung DM, Seyfried NT, Corbett AH, Pavlath GK.

Aging Cell. 2017 Aug;16(4):738-749. doi: 10.1111/acel.12604. Epub 2017 May 23.

8.

High-yield isolation and subcellular proteomic characterization of nuclear and subnuclear structures from trypanosomes.

DeGrasse JA, Chait BT, Field MC, Rout MP.

Methods Mol Biol. 2008;463:77-92. doi: 10.1007/978-1-59745-406-3_6.

PMID:
18951162
9.

Proteomic profiling of H-Ras-G12V induced hypertrophic cardiomyopathy in transgenic mice using comparative LC-MS analysis of thin fresh-frozen tissue sections.

Wei BR, Simpson RM, Johann DJ, Dwyer JE, Prieto DA, Kumar M, Ye X, Luke B, Shive HR, Webster JD, Hoover SB, Veenstra TD, Blonder J.

J Proteome Res. 2012 Mar 2;11(3):1561-70. doi: 10.1021/pr200612y. Epub 2012 Feb 6.

PMID:
22214408
10.

Distinct enhancers regulate skeletal and cardiac muscle-specific expression programs of the cardiac alpha-actin gene in Xenopus embryos.

Latinkić BV, Cooper B, Towers N, Sparrow D, Kotecha S, Mohun TJ.

Dev Biol. 2002 May 1;245(1):57-70.

11.

Specialized compartments of cardiac nuclei exhibit distinct proteomic anatomy.

Franklin S, Zhang MJ, Chen H, Paulsson AK, Mitchell-Jordan SA, Li Y, Ping P, Vondriska TM.

Mol Cell Proteomics. 2011 Jan;10(1):M110.000703. doi: 10.1074/mcp.M110.000703. Epub 2010 Aug 31.

13.

Isolation of transcription factor complexes by in vivo biotinylation tagging and direct binding to streptavidin beads.

Rodriguez P, Braun H, Kolodziej KE, de Boer E, Campbell J, Bonte E, Grosveld F, Philipsen S, Strouboulis J.

Methods Mol Biol. 2006;338:305-23.

PMID:
16888367
14.

Developmental expression and cardiac transcriptional regulation of Myh7b, a third myosin heavy chain in the vertebrate heart.

Warkman AS, Whitman SA, Miller MK, Garriock RJ, Schwach CM, Gregorio CC, Krieg PA.

Cytoskeleton (Hoboken). 2012 May;69(5):324-35. doi: 10.1002/cm.21029. Epub 2012 Apr 30. Erratum in: Cytoskeleton (Hoboken). 2012 Dec;69(12):1086.

15.

Protein trafficking and anchoring complexes revealed by proteomic analysis of inward rectifier potassium channel (Kir2.x)-associated proteins.

Leonoudakis D, Conti LR, Anderson S, Radeke CM, McGuire LM, Adams ME, Froehner SC, Yates JR 3rd, Vandenberg CA.

J Biol Chem. 2004 May 21;279(21):22331-46. Epub 2004 Mar 15.

16.

In vitro nuclear assembly with affinity-purified nuclear envelope precursor vesicle fractions, PV1 and PV2.

Sasagawa S, Yamamoto A, Ichimura T, Omata S, Horigome T.

Eur J Cell Biol. 1999 Aug;78(8):593-600.

PMID:
10494866
17.
18.

Proteomic and bioinformatic analysis of a nuclear intrinsically disordered proteome.

Skupien-Rabian B, Jankowska U, Swiderska B, Lukasiewicz S, Ryszawy D, Dziedzicka-Wasylewska M, Kedracka-Krok S.

J Proteomics. 2016 Jan 1;130:76-84. doi: 10.1016/j.jprot.2015.09.004. Epub 2015 Sep 12.

PMID:
26376097
19.

An off-line high pH reversed-phase fractionation and nano-liquid chromatography-mass spectrometry method for global proteomic profiling of cell lines.

Wang H, Sun S, Zhang Y, Chen S, Liu P, Liu B.

J Chromatogr B Analyt Technol Biomed Life Sci. 2015 Jan 1;974:90-5. doi: 10.1016/j.jchromb.2014.10.031. Epub 2014 Nov 4.

PMID:
25463202
20.

Cysteinyl-tagging of integral membrane proteins for proteomic analysis using liquid chromatography-tandem mass spectrometry.

Mitra SK, Goshe MB.

Methods Mol Biol. 2009;528:311-26. doi: 10.1007/978-1-60327-310-7_22.

PMID:
19153702

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