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Items: 1 to 20 of 94

1.

Emergence and evolutionary analysis of the human DDR network: implications in comparative genomics and downstream analyses.

Arcas A, Fernández-Capetillo O, Cases I, Rojas AM.

Mol Biol Evol. 2014 Apr;31(4):940-61. doi: 10.1093/molbev/msu046. Epub 2014 Jan 16.

2.

SOG1: a master regulator of the DNA damage response in plants.

Yoshiyama KO.

Genes Genet Syst. 2016;90(4):209-16. doi: 10.1266/ggs.15-00011. Epub 2015 Nov 26. Review.

3.

Robustness and adaptation reveal plausible cell cycle controlling subnetwork in Saccharomyces cerevisiae.

Huang JY, Huang CW, Kao KC, Lai PY.

Gene. 2013 Apr 10;518(1):35-41. doi: 10.1016/j.gene.2012.11.088. Epub 2012 Dec 27.

PMID:
23274654
4.

DDRprot: a database of DNA damage response-related proteins.

Andrés-León E, Cases I, Arcas A, Rojas AM.

Database (Oxford). 2016 Aug 29;2016. pii: baw123. doi: 10.1093/database/baw123. Print 2016.

5.

Identification of novel genes involved in DNA damage response by screening a genome-wide Schizosaccharomyces pombe deletion library.

Pan X, Lei B, Zhou N, Feng B, Yao W, Zhao X, Yu Y, Lu H.

BMC Genomics. 2012 Nov 23;13:662. doi: 10.1186/1471-2164-13-662.

6.

Spatiotemporal regulation of posttranslational modifications in the DNA damage response.

Dantuma NP, van Attikum H.

EMBO J. 2016 Jan 4;35(1):6-23. doi: 10.15252/embj.201592595. Epub 2015 Dec 1. Review.

7.

Acetylation dynamics of human nuclear proteins during the ionizing radiation-induced DNA damage response.

Bennetzen MV, Larsen DH, Dinant C, Watanabe S, Bartek J, Lukas J, Andersen JS.

Cell Cycle. 2013 Jun 1;12(11):1688-95. doi: 10.4161/cc.24758. Epub 2013 May 1.

8.

Regulators in the DNA damage response.

Liu Y, Li Y, Lu X.

Arch Biochem Biophys. 2016 Mar 15;594:18-25. doi: 10.1016/j.abb.2016.02.018. Epub 2016 Feb 13. Review.

PMID:
26882840
9.

Histone modifications: crucial elements for damage response and chromatin restoration.

Zhu Q, Wani AA.

J Cell Physiol. 2010 May;223(2):283-8. doi: 10.1002/jcp.22060. Review.

10.

RNF20-RNF40: A ubiquitin-driven link between gene expression and the DNA damage response.

Shiloh Y, Shema E, Moyal L, Oren M.

FEBS Lett. 2011 Sep 16;585(18):2795-802. doi: 10.1016/j.febslet.2011.07.034. Epub 2011 Aug 4. Review.

11.

DNA damage response and prostate cancer: defects, regulation and therapeutic implications.

Karanika S, Karantanos T, Li L, Corn PG, Thompson TC.

Oncogene. 2015 May 28;34(22):2815-22. doi: 10.1038/onc.2014.238. Epub 2014 Aug 18. Review.

12.

Regulation of UV-induced DNA damage response by ubiquitylation.

Bergink S, Jaspers NG, Vermeulen W.

DNA Repair (Amst). 2007 Sep 1;6(9):1231-42. Epub 2007 Mar 23. Review.

PMID:
17363340
13.

Evolution of gene function and regulatory control after whole-genome duplication: comparative analyses in vertebrates.

Kassahn KS, Dang VT, Wilkins SJ, Perkins AC, Ragan MA.

Genome Res. 2009 Aug;19(8):1404-18. doi: 10.1101/gr.086827.108. Epub 2009 May 13.

14.

The Role of the COP9 Signalosome and Neddylation in DNA Damage Signaling and Repair.

Chung D, Dellaire G.

Biomolecules. 2015 Sep 30;5(4):2388-416. doi: 10.3390/biom5042388. Review.

15.

DNA Damage Repair System in Plants: A Worldwide Research Update.

Gimenez E, Manzano-Agugliaro F.

Genes (Basel). 2017 Oct 30;8(11). pii: E299. doi: 10.3390/genes8110299. Review.

16.

Two- and three-dimensional live cell imaging of DNA damage response proteins.

Beckta JM, Henderson SC, Valerie K.

J Vis Exp. 2012 Sep 28;(67). pii: 4251. doi: 10.3791/4251.

17.

Unraveling DNA damage response-signaling networks through systems approaches.

von Stechow L, van de Water B, Danen EH.

Arch Toxicol. 2013 Sep;87(9):1635-48. doi: 10.1007/s00204-013-1106-5. Epub 2013 Aug 13. Review.

PMID:
23943208
18.

Regulatory network structure as a dominant determinant of transcription factor evolutionary rate.

Coulombe-Huntington J, Xia Y.

PLoS Comput Biol. 2012;8(10):e1002734. doi: 10.1371/journal.pcbi.1002734. Epub 2012 Oct 18.

19.

p53 shapes genome-wide and cell type-specific changes in microRNA expression during the human DNA damage response.

Hattori H, Janky R, Nietfeld W, Aerts S, Madan Babu M, Venkitaraman AR.

Cell Cycle. 2014;13(16):2572-86. doi: 10.4161/15384101.2015.942209.

20.

DNA Damage Repair in the Context of Plant Chromatin.

Donà M, Mittelsten Scheid O.

Plant Physiol. 2015 Aug;168(4):1206-18. doi: 10.1104/pp.15.00538. Epub 2015 Jun 18. Review.

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