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Deciphering small noncoding RNAs during the transition from dormant embryo to germinated embryo in Larches (Larix leptolepis).

Zhang J, Zhang S, Han S, Li X, Tong Z, Qi L.

PLoS One. 2013 Dec 10;8(12):e81452. doi: 10.1371/journal.pone.0081452. eCollection 2013.


Dynamic expression of small RNA populations in larch (Larix leptolepis).

Zhang J, Wu T, Li L, Han S, Li X, Zhang S, Qi L.

Planta. 2013 Jan;237(1):89-101. doi: 10.1007/s00425-012-1753-4. Epub 2012 Sep 16.


Genome-wide identification of microRNAs in larch and stage-specific modulation of 11 conserved microRNAs and their targets during somatic embryogenesis.

Zhang J, Zhang S, Han S, Wu T, Li X, Li W, Qi L.

Planta. 2012 Aug;236(2):647-57. doi: 10.1007/s00425-012-1643-9. Epub 2012 Apr 13.


Transcriptome Analysis of mRNA and miRNA in Somatic Embryos of Larix leptolepis Subjected to Hydrogen Treatment.

Liu Y, Han S, Ding X, Li X, Zhang L, Li W, Xu H, Li Z, Qi L.

Int J Mol Sci. 2016 Nov 22;17(11). pii: E1951.


Genome-wide identification of different dormant Medicago sativa L. MicroRNAs in response to fall dormancy.

Fan W, Zhang S, Du H, Sun X, Shi Y, Wang C.

PLoS One. 2014 Dec 4;9(12):e114612. doi: 10.1371/journal.pone.0114612. eCollection 2014.


Identification and characterization of small non-coding RNAs from Chinese fir by high throughput sequencing.

Wan LC, Wang F, Guo X, Lu S, Qiu Z, Zhao Y, Zhang H, Lin J.

BMC Plant Biol. 2012 Aug 15;12:146. doi: 10.1186/1471-2229-12-146.


A comprehensive expression profile of microRNAs and other classes of non-coding small RNAs in barley under phosphorous-deficient and -sufficient conditions.

Hackenberg M, Huang PJ, Huang CY, Shi BJ, Gustafson P, Langridge P.

DNA Res. 2013 Apr;20(2):109-25. doi: 10.1093/dnares/dss037. Epub 2012 Dec 23.


Functions of microRNA in seed development, dormancy and germination processes.

Wei J, Lu XJ, Zhang XL, Mei M, Huang XL.

Yi Chuan. 2017 Jan 20;39(1):14-21. doi: 10.16288/j.yczz.16-268. Review.


Genome-wide analysis reveals dynamic changes in expression of microRNAs during vascular cambium development in Chinese fir, Cunninghamia lanceolata.

Qiu Z, Li X, Zhao Y, Zhang M, Wan Y, Cao D, Lu S, Lin J.

J Exp Bot. 2015 Jun;66(11):3041-54. doi: 10.1093/jxb/erv103. Epub 2015 Mar 20.


Sex specific expression and distribution of small RNAs in papaya.

Aryal R, Jagadeeswaran G, Zheng Y, Yu Q, Sunkar R, Ming R.

BMC Genomics. 2014 Jan 13;15:20. doi: 10.1186/1471-2164-15-20.


Isolation of microRNAs that regulate seed dormancy and germination.

Kumar MB, Martin RC, Nonogaki H.

Methods Mol Biol. 2011;773:199-213. doi: 10.1007/978-1-61779-231-1_13.


Identification and characterization of maize microRNAs involved in the very early stage of seed germination.

Wang L, Liu H, Li D, Chen H.

BMC Genomics. 2011 Mar 18;12:154. doi: 10.1186/1471-2164-12-154.


Highly Sprouting-Tolerant Wheat Grain Exhibits Extreme Dormancy and Cold Imbibition-Resistant Accumulation of Abscisic Acid.

Kashiwakura Y, Kobayashi D, Jikumaru Y, Takebayashi Y, Nambara E, Seo M, Kamiya Y, Kushiro T, Kawakami N.

Plant Cell Physiol. 2016 Apr;57(4):715-32. doi: 10.1093/pcp/pcw051. Epub 2016 Mar 12.


Gene expression profiles of Arabidopsis Cvi seeds during dormancy cycling indicate a common underlying dormancy control mechanism.

Cadman CS, Toorop PE, Hilhorst HW, Finch-Savage WE.

Plant J. 2006 Jun;46(5):805-22. Erratum in: Plant J. 2006 Jul;47(1):164.


Small RNA and PARE sequencing in flower bud reveal the involvement of sRNAs in endodormancy release of Japanese pear (Pyrus pyrifolia 'Kosui').

Bai S, Saito T, Ito A, Tuan PA, Xu Y, Teng Y, Moriguchi T.

BMC Genomics. 2016 Mar 15;17:230. doi: 10.1186/s12864-016-2514-8.


Expression of genes associated with the biosynthetic pathways of abscisic acid, gibberellin, and ethylene during the germination of lettuce seeds.

Clemente AC, Guimarães RM, Martins DC, Gomes LA, Caixeta F, Reis RG, Rosa SD.

Genet Mol Res. 2015 May 11;14(2):4703-15. doi: 10.4238/2015.May.11.3.


Evidence for small RNAs homologous to effector-encoding genes and transposable elements in the oomycete Phytophthora infestans.

Vetukuri RR, Åsman AK, Tellgren-Roth C, Jahan SN, Reimegård J, Fogelqvist J, Savenkov E, Söderbom F, Avrova AO, Whisson SC, Dixelius C.

PLoS One. 2012;7(12):e51399. doi: 10.1371/journal.pone.0051399. Epub 2012 Dec 14.


Identification and expression profiles of sRNAs and their biogenesis and action-related genes in male and female cones of Pinus tabuliformis.

Niu SH, Liu C, Yuan HW, Li P, Li Y, Li W.

BMC Genomics. 2015 Sep 15;16:693. doi: 10.1186/s12864-015-1885-6.


Stage-specific regulation of four HD-ZIP III transcription factors during polar pattern formation in Larix leptolepis somatic embryos.

Li SG, Li WF, Han SY, Yang WH, Qi LW.

Gene. 2013 Jun 15;522(2):177-83. doi: 10.1016/j.gene.2013.03.117. Epub 2013 Apr 6.


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