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Items: 1 to 20 of 111

1.

Dissection of the octoploid strawberry genome by deep sequencing of the genomes of Fragaria species.

Hirakawa H, Shirasawa K, Kosugi S, Tashiro K, Nakayama S, Yamada M, Kohara M, Watanabe A, Kishida Y, Fujishiro T, Tsuruoka H, Minami C, Sasamoto S, Kato M, Nanri K, Komaki A, Yanagi T, Guoxin Q, Maeda F, Ishikawa M, Kuhara S, Sato S, Tabata S, Isobe SN.

DNA Res. 2014;21(2):169-81. doi: 10.1093/dnares/dst049.

2.

Construction of an integrated high density simple sequence repeat linkage map in cultivated strawberry (Fragaria × ananassa) and its applicability.

Isobe SN, Hirakawa H, Sato S, Maeda F, Ishikawa M, Mori T, Yamamoto Y, Shirasawa K, Kimura M, Fukami M, Hashizume F, Tsuji T, Sasamoto S, Kato M, Nanri K, Tsuruoka H, Minami C, Takahashi C, Wada T, Ono A, Kawashima K, Nakazaki N, Kishida Y, Kohara M, Nakayama S, Yamada M, Fujishiro T, Watanabe A, Tabata S.

DNA Res. 2013 Feb;20(1):79-92. doi: 10.1093/dnares/dss035.

3.

Evolutionary origins and dynamics of octoploid strawberry subgenomes revealed by dense targeted capture linkage maps.

Tennessen JA, Govindarajulu R, Ashman TL, Liston A.

Genome Biol Evol. 2014 Dec 4;6(12):3295-313. doi: 10.1093/gbe/evu261.

4.

A microsatellite linkage map for the cultivated strawberry (Fragaria × ananassa) suggests extensive regions of homozygosity in the genome that may have resulted from breeding and selection.

Sargent DJ, Passey T, Surbanovski N, Lopez Girona E, Kuchta P, Davik J, Harrison R, Passey A, Whitehouse AB, Simpson DW.

Theor Appl Genet. 2012 May;124(7):1229-40. doi: 10.1007/s00122-011-1782-6.

PMID:
22218676
5.

Comparative genetic mapping between octoploid and diploid Fragaria species reveals a high level of colinearity between their genomes and the essentially disomic behavior of the cultivated octoploid strawberry.

Rousseau-Gueutin M, Lerceteau-Köhler E, Barrot L, Sargent DJ, Monfort A, Simpson D, Arús P, Guérin G, Denoyes-Rothan B.

Genetics. 2008 Aug;179(4):2045-60. doi: 10.1534/genetics.107.083840.

6.

Diversity Arrays Technology (DArT) Marker Platforms for Diversity Analysis and Linkage Mapping in a Complex Crop, the Octoploid Cultivated Strawberry (Fragaria × ananassa).

Sánchez-Sevilla JF, Horvath A, Botella MA, Gaston A, Folta K, Kilian A, Denoyes B, Amaya I.

PLoS One. 2015 Dec 16;10(12):e0144960. doi: 10.1371/journal.pone.0144960.

7.

Development and preliminary evaluation of a 90 K Axiom® SNP array for the allo-octoploid cultivated strawberry Fragaria × ananassa.

Bassil NV, Davis TM, Zhang H, Ficklin S, Mittmann M, Webster T, Mahoney L, Wood D, Alperin ES, Rosyara UR, Koehorst-Vanc Putten H, Monfort A, Sargent DJ, Amaya I, Denoyes B, Bianco L, van Dijk T, Pirani A, Iezzoni A, Main D, Peace C, Yang Y, Whitaker V, Verma S, Bellon L, Brew F, Herrera R, van de Weg E.

BMC Genomics. 2015 Mar 7;16:155. doi: 10.1186/s12864-015-1310-1.

8.

Isolation and characterization of genomic retrotransposon sequences from octoploid strawberry (Fragaria x ananassa Duch.).

Ma Y, Sun H, Zhao G, Dai H, Gao X, Li H, Zhang Z.

Plant Cell Rep. 2008 Mar;27(3):499-507.

PMID:
18026732
9.

HaploSNP affinities and linkage map positions illuminate subgenome composition in the octoploid, cultivated strawberry (Fragaria×ananassa).

Sargent DJ, Yang Y, Šurbanovski N, Bianco L, Buti M, Velasco R, Giongo L, Davis TM.

Plant Sci. 2016 Jan;242:140-50. doi: 10.1016/j.plantsci.2015.07.004.

PMID:
26566832
10.

Insight into octoploid strawberry (Fragaria) subgenome composition revealed by GISH analysis of pentaploid hybrids.

Liu B, Poulsen EG, Davis TM.

Genome. 2016 Feb;59(2):79-86. doi: 10.1139/gen-2015-0116.

PMID:
26835888
11.

Expressed sequence tags (ESTs) and simple sequence repeat (SSR) markers from octoploid strawberry (Fragaria x ananassa).

Folta KM, Staton M, Stewart PJ, Jung S, Bies DH, Jesdurai C, Main D.

BMC Plant Biol. 2005 Jun 28;5:12.

12.

Insights into phylogeny, sex function and age of Fragaria based on whole chloroplast genome sequencing.

Njuguna W, Liston A, Cronn R, Ashman TL, Bassil N.

Mol Phylogenet Evol. 2013 Jan;66(1):17-29. doi: 10.1016/j.ympev.2012.08.026.

PMID:
22982444
14.

The genome of woodland strawberry (Fragaria vesca).

Shulaev V, Sargent DJ, Crowhurst RN, Mockler TC, Folkerts O, Delcher AL, Jaiswal P, Mockaitis K, Liston A, Mane SP, Burns P, Davis TM, Slovin JP, Bassil N, Hellens RP, Evans C, Harkins T, Kodira C, Desany B, Crasta OR, Jensen RV, Allan AC, Michael TP, Setubal JC, Celton JM, Rees DJ, Williams KP, Holt SH, Ruiz Rojas JJ, Chatterjee M, Liu B, Silva H, Meisel L, Adato A, Filichkin SA, Troggio M, Viola R, Ashman TL, Wang H, Dharmawardhana P, Elser J, Raja R, Priest HD, Bryant DW Jr, Fox SE, Givan SA, Wilhelm LJ, Naithani S, Christoffels A, Salama DY, Carter J, Lopez Girona E, Zdepski A, Wang W, Kerstetter RA, Schwab W, Korban SS, Davik J, Monfort A, Denoyes-Rothan B, Arus P, Mittler R, Flinn B, Aharoni A, Bennetzen JL, Salzberg SL, Dickerman AW, Velasco R, Borodovsky M, Veilleux RE, Folta KM.

Nat Genet. 2011 Feb;43(2):109-16. doi: 10.1038/ng.740.

15.

High variability and disomic segregation of microsatellites in the octoploid Fragaria virginiana Mill. (Rosaceae).

Ashley MV, Wilk JA, Styan SM, Craft KJ, Jones KL, Feldheim KA, Lewers KS, Ashman TL.

Theor Appl Genet. 2003 Nov;107(7):1201-7.

PMID:
12908097
16.

Comparison of nuclear, plastid, and mitochondrial phylogenies and the origin of wild octoploid strawberry species.

Govindarajulu R, Parks M, Tennessen JA, Liston A, Ashman TL.

Am J Bot. 2015 Apr;102(4):544-54. doi: 10.3732/ajb.1500026.

17.

Characterization of mixed disomic and polysomic inheritance in the octoploid strawberry (Fragaria x ananassa) using AFLP mapping.

Lerceteau-Köhler E, Guérin G, Laigret F, Denoyes-Rothan B.

Theor Appl Genet. 2003 Aug;107(4):619-28.

PMID:
12768242
18.
19.

A near-isogenic line (NIL) collection in diploid strawberry and its use in the genetic analysis of morphologic, phenotypic and nutritional characters.

Urrutia M, Bonet J, Arús P, Monfort A.

Theor Appl Genet. 2015 Jul;128(7):1261-75. doi: 10.1007/s00122-015-2503-3.

PMID:
25841354
20.

Generation and analysis of ESTs from strawberry (Fragaria xananassa) fruits and evaluation of their utility in genetic and molecular studies.

Bombarely A, Merchante C, Csukasi F, Cruz-Rus E, Caballero JL, Medina-Escobar N, Blanco-Portales R, Botella MA, Muñoz-Blanco J, Sánchez-Sevilla JF, Valpuesta V.

BMC Genomics. 2010 Sep 17;11:503. doi: 10.1186/1471-2164-11-503.

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