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Items: 1 to 20 of 105

1.

Molecular Isotopic Distribution Analysis (MIDAs) with adjustable mass accuracy.

Alves G, Ogurtsov AY, Yu YK.

J Am Soc Mass Spectrom. 2014 Jan;25(1):57-70. doi: 10.1007/s13361-013-0733-7. Epub 2013 Nov 20.

2.

BRAIN: a universal tool for high-throughput calculations of the isotopic distribution for mass spectrometry.

Dittwald P, Claesen J, Burzykowski T, Valkenborg D, Gambin A.

Anal Chem. 2013 Feb 19;85(4):1991-4. doi: 10.1021/ac303439m. Epub 2013 Jan 31.

PMID:
23350948
3.

An efficient method to calculate the aggregated isotopic distribution and exact center-masses.

Claesen J, Dittwald P, Burzykowski T, Valkenborg D.

J Am Soc Mass Spectrom. 2012 Apr;23(4):753-63. doi: 10.1007/s13361-011-0326-2. Epub 2012 Feb 15.

PMID:
22351289
4.

Computation of isotopic peak center-mass distribution by Fourier transform.

Fernandez-de-Cossio Diaz J, Fernandez-de-Cossio J.

Anal Chem. 2012 Aug 21;84(16):7052-6. doi: 10.1021/ac301296a. Epub 2012 Aug 8.

PMID:
22873736
5.

Memory-efficient calculation of the isotopic mass states of a molecule.

Li L, Karabacak NM, Cobb JS, Wang Q, Hong P, Agar JN.

Rapid Commun Mass Spectrom. 2010 Sep;24(18):2689-96. doi: 10.1002/rcm.4666.

PMID:
20814974
6.

Efficient calculation of exact mass isotopic distributions.

Snider RK.

J Am Soc Mass Spectrom. 2007 Aug;18(8):1511-5. Epub 2007 May 24.

7.

BRAIN 2.0: time and memory complexity improvements in the algorithm for calculating the isotope distribution.

Dittwald P, Valkenborg D.

J Am Soc Mass Spectrom. 2014 Apr;25(4):588-94. doi: 10.1007/s13361-013-0796-5. Epub 2014 Feb 12.

8.

Efficient packing Fourier-transform approach for ultrahigh resolution isotopic distribution calculations.

Fernandez-de-Cossio J.

Anal Chem. 2010 Mar 1;82(5):1759-65. doi: 10.1021/ac9023523.

PMID:
20112948
9.

On the utility of isotopic fine structure mass spectrometry in protein identification.

Miladinović SM, Kozhinov AN, Gorshkov MV, Tsybin YO.

Anal Chem. 2012 May 1;84(9):4042-51. doi: 10.1021/ac2034584. Epub 2012 Apr 12.

PMID:
22468966
10.

The isotopic distribution conundrum.

Valkenborg D, Mertens I, Lemière F, Witters E, Burzykowski T.

Mass Spectrom Rev. 2012 Jan-Feb;31(1):96-109. doi: 10.1002/mas.20339. Epub 2011 May 16. Review.

PMID:
21590704
11.

Computation of the isotopic distribution in two dimensions.

Fernandez-de-Cossio J.

Anal Chem. 2010 Aug 1;82(15):6726-9. doi: 10.1021/ac101039x.

PMID:
20614924
12.
13.

Envelope: interactive software for modeling and fitting complex isotope distributions.

Sykes MT, Williamson JR.

BMC Bioinformatics. 2008 Oct 20;9:446. doi: 10.1186/1471-2105-9-446.

14.

Isotopic peak intensity ratio based algorithm for determination of isotopic clusters and monoisotopic masses of polypeptides from high-resolution mass spectrometric data.

Park K, Yoon JY, Lee S, Paek E, Park H, Jung HJ, Lee SW.

Anal Chem. 2008 Oct 1;80(19):7294-303. doi: 10.1021/ac800913b. Epub 2008 Aug 28.

PMID:
18754627
15.

A hierarchical algorithm for calculating the isotopic fine structures of molecules.

Li L, Kresh JA, Karabacak NM, Cobb JS, Agar JN, Hong P.

J Am Soc Mass Spectrom. 2008 Dec;19(12):1867-74. doi: 10.1016/j.jasms.2008.08.008. Epub 2008 Aug 15.

16.

IsoCor: correcting MS data in isotope labeling experiments.

Millard P, Letisse F, Sokol S, Portais JC.

Bioinformatics. 2012 May 1;28(9):1294-6. doi: 10.1093/bioinformatics/bts127. Epub 2012 Mar 13.

PMID:
22419781
17.

Monoisotopic mass determination algorithm for selenocysteine-containing polypeptides from mass spectrometric data based on theoretical modeling of isotopic peak intensity ratios.

Kim JW, Lee S, Park K, Na S, Paek E, Park HS, Park H, Lee KJ, Jeong J, Kim HY.

J Proteome Res. 2012 Sep 7;11(9):4488-98. doi: 10.1021/pr300232y. Epub 2012 Aug 13.

PMID:
22779694
18.

Isotopic distributions.

Rockwood AL, Palmblad M.

Methods Mol Biol. 2013;1007:65-99. doi: 10.1007/978-1-62703-392-3_3.

PMID:
23666722
19.

Automated intensity descent algorithm for interpretation of complex high-resolution mass spectra.

Chen L, Sze SK, Yang H.

Anal Chem. 2006 Jul 15;78(14):5006-18.

PMID:
16841924
20.

Isotopic compositions and accurate masses of single isotopic peaks.

Rockwood AL, Van Orman JR, Dearden DV.

J Am Soc Mass Spectrom. 2004 Jan;15(1):12-21.

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