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Items: 1 to 20 of 156

1.

Transcriptomic fingerprinting of Pseudomonas putida under alternative physiological regimes.

Kim J, Oliveros JC, Nikel PI, de Lorenzo V, Silva-Rocha R.

Environ Microbiol Rep. 2013 Dec;5(6):883-91. doi: 10.1111/1758-2229.12090. Epub 2013 Sep 5.

PMID:
24249296
2.

The Crc/CrcZ-CrcY global regulatory system helps the integration of gluconeogenic and glycolytic metabolism in Pseudomonas putida.

La Rosa R, Nogales J, Rojo F.

Environ Microbiol. 2015 Sep;17(9):3362-78. doi: 10.1111/1462-2920.12812. Epub 2015 Mar 27.

PMID:
25711694
3.

Two small RNAs, CrcY and CrcZ, act in concert to sequester the Crc global regulator in Pseudomonas putida, modulating catabolite repression.

Moreno R, Fonseca P, Rojo F.

Mol Microbiol. 2012 Jan;83(1):24-40. doi: 10.1111/j.1365-2958.2011.07912.x. Epub 2011 Nov 20.

4.

Metabolic and regulatory rearrangements underlying glycerol metabolism in Pseudomonas putida KT2440.

Nikel PI, Kim J, de Lorenzo V.

Environ Microbiol. 2014 Jan;16(1):239-54. doi: 10.1111/1462-2920.12224. Epub 2013 Aug 22.

PMID:
23967821
5.

Pseudomonas putida growing at low temperature shows increased levels of CrcZ and CrcY sRNAs, leading to reduced Crc-dependent catabolite repression.

Fonseca P, Moreno R, Rojo F.

Environ Microbiol. 2013 Jan;15(1):24-35. doi: 10.1111/j.1462-2920.2012.02708.x. Epub 2012 Feb 23.

PMID:
22360597
6.

Integrated analysis of gene expression and metabolic fluxes in PHA-producing Pseudomonas putida grown on glycerol.

Beckers V, Poblete-Castro I, Tomasch J, Wittmann C.

Microb Cell Fact. 2016 May 3;15:73. doi: 10.1186/s12934-016-0470-2.

7.

Growth phase-dependent expression of the Pseudomonas putida KT2440 transcriptional machinery analysed with a genome-wide DNA microarray.

Yuste L, Hervás AB, Canosa I, Tobes R, Jiménez JI, Nogales J, Pérez-Pérez MM, Santero E, Díaz E, Ramos JL, de Lorenzo V, Rojo F.

Environ Microbiol. 2006 Jan;8(1):165-77.

PMID:
16343331
8.

Insights into the genomic basis of niche specificity of Pseudomonas putida KT2440.

Dos Santos VA, Heim S, Moore ER, Strätz M, Timmis KN.

Environ Microbiol. 2004 Dec;6(12):1264-86.

PMID:
15560824
9.

The glycerol-dependent metabolic persistence of Pseudomonas putida KT2440 reflects the regulatory logic of the GlpR repressor.

Nikel PI, Romero-Campero FJ, Zeidman JA, Goñi-Moreno Á, de Lorenzo V.

MBio. 2015 Mar 31;6(2). pii: e00340-15. doi: 10.1128/mBio.00340-15.

10.

Global regulation of food supply by Pseudomonas putida DOT-T1E.

Daniels C, Godoy P, Duque E, Molina-Henares MA, de la Torre J, Del Arco JM, Herrera C, Segura A, Guazzaroni ME, Ferrer M, Ramos JL.

J Bacteriol. 2010 Apr;192(8):2169-81. doi: 10.1128/JB.01129-09. Epub 2010 Feb 5.

11.
12.
13.

The role of GlpR repressor in Pseudomonas putida KT2440 growth and PHA production from glycerol.

Escapa IF, del Cerro C, García JL, Prieto MA.

Environ Microbiol. 2013 Jan;15(1):93-110. doi: 10.1111/j.1462-2920.2012.02790.x. Epub 2012 May 31.

PMID:
22646161
14.

The sigma-factor FliA, ppGpp and DksA coordinate transcriptional control of the aer2 gene of Pseudomonas putida.

Osterberg S, Skärfstad E, Shingler V.

Environ Microbiol. 2010 Jun;12(6):1439-51. doi: 10.1111/j.1462-2920.2009.02139.x. Epub 2010 Jan 18.

PMID:
20089044
15.

Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440.

Nelson KE, Weinel C, Paulsen IT, Dodson RJ, Hilbert H, Martins dos Santos VA, Fouts DE, Gill SR, Pop M, Holmes M, Brinkac L, Beanan M, DeBoy RT, Daugherty S, Kolonay J, Madupu R, Nelson W, White O, Peterson J, Khouri H, Hance I, Chris Lee P, Holtzapple E, Scanlan D, Tran K, Moazzez A, Utterback T, Rizzo M, Lee K, Kosack D, Moestl D, Wedler H, Lauber J, Stjepandic D, Hoheisel J, Straetz M, Heim S, Kiewitz C, Eisen JA, Timmis KN, Düsterhöft A, Tümmler B, Fraser CM.

Environ Microbiol. 2002 Dec;4(12):799-808. Erratum in: Environ Microbiol. 2003 Jul;5(7):630.

PMID:
12534463
16.

Regulatory exaptation of the catabolite repression protein (Crp)-cAMP system in Pseudomonas putida.

Milanesio P, Arce-Rodríguez A, Muñoz A, Calles B, de Lorenzo V.

Environ Microbiol. 2011 Feb;13(2):324-39. doi: 10.1111/j.1462-2920.2010.02331.x. Epub 2010 Sep 8.

PMID:
21281420
17.

Transcriptional activation of the CrcZ and CrcY regulatory RNAs by the CbrB response regulator in Pseudomonas putida.

García-Mauriño SM, Pérez-Martínez I, Amador CI, Canosa I, Santero E.

Mol Microbiol. 2013 Jul;89(1):189-205. doi: 10.1111/mmi.12270. Epub 2013 Jun 11.

18.
19.

The IHF regulon of exponentially growing Pseudomonas putida cells.

Silva-Rocha R, Chavarría M, Kleijn RJ, Sauer U, de Lorenzo V.

Environ Microbiol. 2013 Jan;15(1):49-63. doi: 10.1111/j.1462-2920.2012.02750.x. Epub 2012 Apr 18.

PMID:
22510163

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