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Items: 1 to 20 of 104

1.

SelenoDB 2.0: annotation of selenoprotein genes in animals and their genetic diversity in humans.

Romagné F, Santesmasses D, White L, Sarangi GK, Mariotti M, Hübler R, Weihmann A, Parra G, Gladyshev VN, Guigó R, Castellano S.

Nucleic Acids Res. 2014 Jan;42(Database issue):D437-43. doi: 10.1093/nar/gkt1045. Epub 2013 Nov 4.

2.

SelenoDB 1.0 : a database of selenoprotein genes, proteins and SECIS elements.

Castellano S, Gladyshev VN, Guigó R, Berry MJ.

Nucleic Acids Res. 2008 Jan;36(Database issue):D332-8. doi: 10.1093/nar/gkm731. Epub 2008 Jan 3.

3.

SECISearch3 and Seblastian: new tools for prediction of SECIS elements and selenoproteins.

Mariotti M, Lobanov AV, Guigo R, Gladyshev VN.

Nucleic Acids Res. 2013 Aug;41(15):e149. doi: 10.1093/nar/gkt550. Epub 2013 Jun 19.

4.

New selenoproteins identified in silico from the genome of Anopheles gambiae.

Jiang L, Liu Q, Chen P, Gao Z, Xu H.

Sci China C Life Sci. 2007 Apr;50(2):251-7.

PMID:
17447033
5.

Selenoprofiles: profile-based scanning of eukaryotic genome sequences for selenoprotein genes.

Mariotti M, Guigó R.

Bioinformatics. 2010 Nov 1;26(21):2656-63. doi: 10.1093/bioinformatics/btq516. Epub 2010 Sep 21.

6.

The microbial selenoproteome of the Sargasso Sea.

Zhang Y, Fomenko DE, Gladyshev VN.

Genome Biol. 2005;6(4):R37. Epub 2005 Mar 29.

7.

Selenoproteins-What unique properties can arise with selenocysteine in place of cysteine?

Arnér ES.

Exp Cell Res. 2010 May 1;316(8):1296-303. doi: 10.1016/j.yexcr.2010.02.032. Epub 2010 Mar 3. Review.

PMID:
20206159
10.

Selenoprofiles: A Computational Pipeline for Annotation of Selenoproteins.

Santesmasses D, Mariotti M, Guigó R.

Methods Mol Biol. 2018;1661:17-28. doi: 10.1007/978-1-4939-7258-6_2.

PMID:
28917034
11.

Nematode selenoproteome: the use of the selenocysteine insertion system to decode one codon in an animal genome?

Taskov K, Chapple C, Kryukov GV, Castellano S, Lobanov AV, Korotkov KV, Guigó R, Gladyshev VN.

Nucleic Acids Res. 2005 Apr 20;33(7):2227-38. Print 2005.

13.

Selenium. Role of the essential metalloid in health.

Kurokawa S, Berry MJ.

Met Ions Life Sci. 2013;13:499-534. doi: 10.1007/978-94-007-7500-8_16. Review.

14.

Relaxation of selective constraints causes independent selenoprotein extinction in insect genomes.

Chapple CE, Guigó R.

PLoS One. 2008 Aug 13;3(8):e2968. doi: 10.1371/journal.pone.0002968. Erratum in: PLoS One. 2009;4(7). doi: 10.1371/annotation/93ab40c4-c4b0-4f77-a18f-804b74825fb7.

15.

SECIS elements in the coding regions of selenoprotein transcripts are functional in higher eukaryotes.

Mix H, Lobanov AV, Gladyshev VN.

Nucleic Acids Res. 2007;35(2):414-23. Epub 2006 Dec 14.

16.

Composition and evolution of the vertebrate and mammalian selenoproteomes.

Mariotti M, Ridge PG, Zhang Y, Lobanov AV, Pringle TH, Guigo R, Hatfield DL, Gladyshev VN.

PLoS One. 2012;7(3):e33066. doi: 10.1371/journal.pone.0033066. Epub 2012 Mar 30.

17.

Computational identification of the selenocysteine tRNA (tRNASec) in genomes.

Santesmasses D, Mariotti M, Guigó R.

PLoS Comput Biol. 2017 Feb 13;13(2):e1005383. doi: 10.1371/journal.pcbi.1005383. eCollection 2017 Feb.

18.

An algorithm for identification of bacterial selenocysteine insertion sequence elements and selenoprotein genes.

Zhang Y, Gladyshev VN.

Bioinformatics. 2005 Jun 1;21(11):2580-9. Epub 2005 Mar 29.

19.

The prokaryotic selenoproteome.

Kryukov GV, Gladyshev VN.

EMBO Rep. 2004 May;5(5):538-43. Epub 2004 Apr 23.

20.

Characterization of the UGA-recoding and SECIS-binding activities of SECIS-binding protein 2.

Bubenik JL, Miniard AC, Driscoll DM.

RNA Biol. 2014;11(11):1402-13. doi: 10.1080/15476286.2014.996472.

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