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Fluorescence in situ hybridization probing of protozoal Entodinium spp. and their methanogenic colonizers in the rumen of cattle fed alfalfa hay or triticale straw.

Xia Y, Kong YH, Seviour R, Forster RJ, Kisidayova S, McAllister TA.

J Appl Microbiol. 2014 Jan;116(1):14-22. doi: 10.1111/jam.12356. Epub 2013 Oct 24.


Biodiversity and composition of methanogenic populations in the rumen of cows fed alfalfa hay or triticale straw.

Kong Y, Xia Y, Seviour R, Forster R, McAllister TA.

FEMS Microbiol Ecol. 2013 May;84(2):302-15. doi: 10.1111/1574-6941.12062. Epub 2013 Jan 8.


The importance of methanogens associated with ciliate protozoa in ruminal methane production in vitro.

Newbold CJ, Lassalas B, Jouany JP.

Lett Appl Microbiol. 1995 Oct;21(4):230-4.


In situ identification of carboxymethyl cellulose-digesting bacteria in the rumen of cattle fed alfalfa or triticale.

Kong Y, Xia Y, Seviour R, He M, McAllister T, Forster R.

FEMS Microbiol Ecol. 2012 Apr;80(1):159-67. doi: 10.1111/j.1574-6941.2011.01295.x. Epub 2012 Jan 18.


Structures of free-living and protozoa-associated methanogen communities in the bovine rumen differ according to comparative analysis of 16S rRNA and mcrA genes.

Tymensen LD, Beauchemin KA, McAllister TA.

Microbiology. 2012 Jul;158(Pt 7):1808-17. doi: 10.1099/mic.0.057984-0. Epub 2012 Apr 26.


Methanogenic population and CH₄ production in swedish dairy cows fed different levels of forage.

Danielsson R, Schnürer A, Arthurson V, Bertilsson J.

Appl Environ Microbiol. 2012 Sep;78(17):6172-9. doi: 10.1128/AEM.00675-12. Epub 2012 Jun 29.


16S rDNA directed PCR primers and detection of methanogens in the bovine rumen.

Skillman LC, Evans PN, Strömpl C, Joblin KN.

Lett Appl Microbiol. 2006 Mar;42(3):222-8.


Impact of high-concentrate feeding and low ruminal pH on methanogens and protozoa in the rumen of dairy cows.

Hook SE, Steele MA, Northwood KS, Wright AD, McBride BW.

Microb Ecol. 2011 Jul;62(1):94-105. doi: 10.1007/s00248-011-9881-0. Epub 2011 May 31.


A re-appraisal of the diversity of the methanogens associated with the rumen ciliates.

Regensbogenova M, McEwan NR, Javorsky P, Kisidayova S, Michalowski T, Newbold CJ, Hackstein JH, Pristas P.

FEMS Microbiol Lett. 2004 Sep 15;238(2):307-13.


Phylogenetic analysis of methanogens in sheep rumen ecosystem and detection of Methanomicrobium mobile By fluorescence in situ hybridization.

Yanagita K, Kamagata Y, Kawaharasaki M, Suzuki T, Nakamura Y, Minato H.

Biosci Biotechnol Biochem. 2000 Aug;64(8):1737-42.


Phylogenetic study of methanogens associated with rumen ciliates.

Tokura M, Chagan I, Ushida K, Kojima Y.

Curr Microbiol. 1999 Sep;39(3):123-8.


Relationship between rumen methanogens and methane production in dairy cows fed diets supplemented with a feed enzyme additive.

Zhou M, Chung YH, Beauchemin KA, Holtshausen L, Oba M, McAllister TA, Guan LL.

J Appl Microbiol. 2011 Nov;111(5):1148-58. doi: 10.1111/j.1365-2672.2011.05126.x. Epub 2011 Sep 8.


Response of the Rumen Microbiota of Sika Deer (Cervus nippon) Fed Different Concentrations of Tannin Rich Plants.

Li Z, Wright AD, Liu H, Fan Z, Yang F, Zhang Z, Li G.

PLoS One. 2015 May 8;10(5):e0123481. doi: 10.1371/journal.pone.0123481. eCollection 2015.


Assessment of protozoa in Yunnan Yellow cattle rumen based on the 18S rRNA sequences.

Leng J, Zhong X, Zhu RJ, Yang SL, Gou X, Mao HM.

Mol Biol Rep. 2011 Jan;38(1):577-85. doi: 10.1007/s11033-010-0143-x. Epub 2010 Apr 1.


The role of ciliate protozoa in the lysis of methanogenic archaea in rumen fluid.

Newbold CJ, Ushida K, Morvan B, Fonty G, Jouany JP.

Lett Appl Microbiol. 1996 Dec;23(6):421-5.


Considerations in the use of fluorescence in situ hybridization (FISH) and confocal laser scanning microscopy to characterize rumen methanogens and define their spatial distributions.

Valle ER, Henderson G, Janssen PH, Cox F, Alexander TW, McAllister TA.

Can J Microbiol. 2015 Jun;61(6):417-28. doi: 10.1139/cjm-2014-0873. Epub 2015 Mar 25.


Bacterial protein degradation by different rumen protozoal groups.

Belanche A, de la Fuente G, Moorby JM, Newbold CJ.

J Anim Sci. 2012 Dec;90(12):4495-504. doi: 10.2527/jas.2012-5118. Epub 2012 Jul 24.


Rumen methanogenic genotypes differ in abundance according to host residual feed intake phenotype and diet type.

Carberry CA, Waters SM, Kenny DA, Creevey CJ.

Appl Environ Microbiol. 2014 Jan;80(2):586-94. doi: 10.1128/AEM.03131-13. Epub 2013 Nov 8. Erratum in: Appl Environ Microbiol. 2014 Mar;80(6):2039. Waters, Sinead M [corrected to Waters, Sinéad M].


Assessment of the microbial ecology of ruminal methanogens in cattle with different feed efficiencies.

Zhou M, Hernandez-Sanabria E, Guan LL.

Appl Environ Microbiol. 2009 Oct;75(20):6524-33. doi: 10.1128/AEM.02815-08. Epub 2009 Aug 28.

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