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Items: 1 to 20 of 101

1.

Small angle X-ray scattering studies of mitochondrial glutaminase C reveal extended flexible regions, and link oligomeric state with enzyme activity.

Møller M, Nielsen SS, Ramachandran S, Li Y, Tria G, Streicher W, Petoukhov MV, Cerione RA, Gillilan RE, Vestergaard B.

PLoS One. 2013 Sep 30;8(9):e74783. doi: 10.1371/journal.pone.0074783. Erratum in: PLoS One. 2013;8(12). doi:10.1371/annotation/80d64df5-065e-4be9-a4e8-31c4cba67114. Li, Yuxing [corrected to Li, Yunxing].

2.

Active glutaminase C self-assembles into a supratetrameric oligomer that can be disrupted by an allosteric inhibitor.

Ferreira AP, Cassago A, Gonçalves Kde A, Dias MM, Adamoski D, Ascenção CF, Honorato RV, de Oliveira JF, Ferreira IM, Fornezari C, Bettini J, Oliveira PS, Paes Leme AF, Portugal RV, Ambrosio AL, Dias SM.

J Biol Chem. 2013 Sep 27;288(39):28009-20. doi: 10.1074/jbc.M113.501346.

3.

Structural basis for the active site inhibition mechanism of human kidney-type glutaminase (KGA).

Thangavelu K, Chong QY, Low BC, Sivaraman J.

Sci Rep. 2014 Jan 23;4:3827. doi: 10.1038/srep03827.

4.

Mitochondrial localization and structure-based phosphate activation mechanism of Glutaminase C with implications for cancer metabolism.

Cassago A, Ferreira AP, Ferreira IM, Fornezari C, Gomes ER, Greene KS, Pereira HM, Garratt RC, Dias SM, Ambrosio AL.

Proc Natl Acad Sci U S A. 2012 Jan 24;109(4):1092-7. doi: 10.1073/pnas.1112495109.

5.

Robust, high-throughput solution structural analyses by small angle X-ray scattering (SAXS).

Hura GL, Menon AL, Hammel M, Rambo RP, Poole FL 2nd, Tsutakawa SE, Jenney FE Jr, Classen S, Frankel KA, Hopkins RC, Yang SJ, Scott JW, Dillard BD, Adams MW, Tainer JA.

Nat Methods. 2009 Aug;6(8):606-12. doi: 10.1038/nmeth.1353.

6.

Structural characterization of proteins and complexes using small-angle X-ray solution scattering.

Mertens HD, Svergun DI.

J Struct Biol. 2010 Oct;172(1):128-41. doi: 10.1016/j.jsb.2010.06.012. Review.

PMID:
20558299
7.

Crystal structures capture three states in the catalytic cycle of a pyridoxal phosphate (PLP) synthase.

Smith AM, Brown WC, Harms E, Smith JL.

J Biol Chem. 2015 Feb 27;290(9):5226-39. doi: 10.1074/jbc.M114.626382.

8.

A practical guide to small angle X-ray scattering (SAXS) of flexible and intrinsically disordered proteins.

Kikhney AG, Svergun DI.

FEBS Lett. 2015 Sep 14;589(19 Pt A):2570-7. doi: 10.1016/j.febslet.2015.08.027. Review.

9.

Full-length human glutaminase in complex with an allosteric inhibitor.

DeLaBarre B, Gross S, Fang C, Gao Y, Jha A, Jiang F, Song J J, Wei W, Hurov JB.

Biochemistry. 2011 Dec 20;50(50):10764-70. doi: 10.1021/bi201613d.

PMID:
22049910
10.

High-throughput small angle X-ray scattering from proteins in solution using a microfluidic front-end.

Toft KN, Vestergaard B, Nielsen SS, Snakenborg D, Jeppesen MG, Jacobsen JK, Arleth L, Kutter JP.

Anal Chem. 2008 May 15;80(10):3648-54. doi: 10.1021/ac800011y.

PMID:
18422341
11.

Structural models of mammalian mitochondrial transcription factor B2.

Moustafa IM, Uchida A, Wang Y, Yennawar N, Cameron CE.

Biochim Biophys Acta. 2015 Aug;1849(8):987-1002. doi: 10.1016/j.bbagrm.2015.05.010.

PMID:
26066983
12.

Crystal structure of a major fragment of the salt-tolerant glutaminase from Micrococcus luteus K-3.

Yoshimune K, Shirakihara Y, Shiratori A, Wakayama M, Chantawannakul P, Moriguchi M.

Biochem Biophys Res Commun. 2006 Aug 11;346(4):1118-24.

PMID:
16793004
13.

Synchrotron small-angle X-ray scattering studies of the structure of porcine pepsin under various pH conditions.

Jin KS, Rho Y, Kim J, Kim H, Kim IJ, Ree M.

J Phys Chem B. 2008 Dec 11;112(49):15821-7. doi: 10.1021/jp805940d.

PMID:
19367902
14.

Structural analysis of flexible proteins in solution by small angle X-ray scattering combined with crystallography.

Tsutakawa SE, Hura GL, Frankel KA, Cooper PK, Tainer JA.

J Struct Biol. 2007 May;158(2):214-23.

PMID:
17182256
15.

The hexameric structure of the human mitochondrial replicative helicase Twinkle.

Fernández-Millán P, Lázaro M, Cansız-Arda Ş, Gerhold JM, Rajala N, Schmitz CA, Silva-Espiña C, Gil D, Bernadó P, Valle M, Spelbrink JN, Solà M.

Nucleic Acids Res. 2015 Apr 30;43(8):4284-95. doi: 10.1093/nar/gkv189.

16.

Application of SAXS for the Structural Characterization of IDPs.

Kachala M, Valentini E, Svergun DI.

Adv Exp Med Biol. 2015;870:261-89. doi: 10.1007/978-3-319-20164-1_8. Review.

PMID:
26387105
17.

Destabilization of the homotetrameric assembly of 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase from the hyperthermophile Pyrococcus furiosus enhances enzymatic activity.

Nazmi AR, Schofield LR, Dobson RC, Jameson GB, Parker EJ.

J Mol Biol. 2014 Feb 6;426(3):656-73. doi: 10.1016/j.jmb.2013.11.008.

PMID:
24239948
18.

Macromolecular docking restrained by a small angle X-ray scattering profile.

Schneidman-Duhovny D, Hammel M, Sali A.

J Struct Biol. 2011 Mar;173(3):461-71. doi: 10.1016/j.jsb.2010.09.023.

19.

Oligomeric Hsp33 with enhanced chaperone activity: gel filtration, cross-linking, and small angle x-ray scattering (SAXS) analysis.

Akhtar MW, Srinivas V, Raman B, Ramakrishna T, Inobe T, Maki K, Arai M, Kuwajima K, Rao ChM.

J Biol Chem. 2004 Dec 31;279(53):55760-9.

20.

Use of small-angle X-ray scattering to investigate the structure and function of dengue virus NS3 and NS5.

Choi KH, Morais M.

Methods Mol Biol. 2014;1138:241-52. doi: 10.1007/978-1-4939-0348-1_15.

PMID:
24696341

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