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Items: 1 to 20 of 113

1.

Oligonucleotides labeled with single fluorophores as sensors for deoxynucleotide triphosphate binding by DNA polymerases.

Nikiforov TT.

Anal Biochem. 2014 Jan 1;444:60-6. doi: 10.1016/j.ab.2013.09.024. Epub 2013 Oct 1.

PMID:
24096197
3.
4.

Distinct complexes of DNA polymerase I (Klenow fragment) for base and sugar discrimination during nucleotide substrate selection.

Garalde DR, Simon CA, Dahl JM, Wang H, Akeson M, Lieberman KR.

J Biol Chem. 2011 Apr 22;286(16):14480-92. doi: 10.1074/jbc.M111.218750. Epub 2011 Feb 28.

5.
7.

Incorporation of 2'-deoxy-2'-isonucleoside 5'-triphosphates (iNTPs) into DNA by A- and B-family DNA polymerases with different recognition mechanisms.

Ogino T, Sato K, Matsuda A.

Chembiochem. 2010 Dec 10;11(18):2597-605. doi: 10.1002/cbic.201000449.

PMID:
21108267
8.

How E. coli DNA polymerase I (Klenow fragment) distinguishes between deoxy- and dideoxynucleotides.

Astatke M, Grindley ND, Joyce CM.

J Mol Biol. 1998 Apr 24;278(1):147-65.

PMID:
9571040
10.

Single-molecule microscopy reveals new insights into nucleotide selection by DNA polymerase I.

Markiewicz RP, Vrtis KB, Rueda D, Romano LJ.

Nucleic Acids Res. 2012 Sep;40(16):7975-84. doi: 10.1093/nar/gks523. Epub 2012 Jun 4.

11.

Methods for sample labeling and meniscus determination in the fluorescence-detected analytical ultracentrifuge.

Bailey MF, Angley LM, Perugini MA.

Anal Biochem. 2009 Jul 15;390(2):218-20. doi: 10.1016/j.ab.2009.03.045. Epub 2009 Apr 5.

PMID:
19348779
12.

Conformational changes during normal and error-prone incorporation of nucleotides by a Y-family DNA polymerase detected by 2-aminopurine fluorescence.

DeLucia AM, Grindley ND, Joyce CM.

Biochemistry. 2007 Sep 25;46(38):10790-803. Epub 2007 Aug 29.

PMID:
17725324
13.

Discrimination between right and wrong purine dNTPs by DNA polymerase I from Bacillus stearothermophilus.

Trostler M, Delier A, Beckman J, Urban M, Patro JN, Spratt TE, Beese LS, Kuchta RD.

Biochemistry. 2009 Jun 2;48(21):4633-41. doi: 10.1021/bi900104n.

14.
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[Interaction of dNTP-binding sites of human DNA polymerase alpha and The Klenow fragment of Escherichia coli DNA polymerase I with nucleotides, pyrophosphate and their analogs].

Nevinskiń≠ GA, Potapova IA, Tarusova NB, Khalabuda OV, Khomov VV.

Mol Biol (Mosk). 1990 Jan-Feb;24(1):104-16. Russian.

PMID:
2161489
16.

Conformational transitions in DNA polymerase I revealed by single-molecule FRET.

Santoso Y, Joyce CM, Potapova O, Le Reste L, Hohlbein J, Torella JP, Grindley ND, Kapanidis AN.

Proc Natl Acad Sci U S A. 2010 Jan 12;107(2):715-20. doi: 10.1073/pnas.0910909107. Epub 2009 Dec 18.

17.

Facile polymerization of dNTPs bearing unnatural base analogues by DNA polymerase alpha and Klenow fragment (DNA polymerase I).

Chiaramonte M, Moore CL, Kincaid K, Kuchta RD.

Biochemistry. 2003 Sep 9;42(35):10472-81.

PMID:
12950174
20.

Consecutive incorporation of fluorophore-labeled nucleotides by mammalian DNA polymerase beta.

Hirano K, Yoshida Y, Ishido T, Wada Y, Moriya N, Yamazaki N, Mizushina Y, Baba Y, Ishikawa M.

Anal Biochem. 2010 Oct 15;405(2):160-7. doi: 10.1016/j.ab.2010.06.005. Epub 2010 Jun 4.

PMID:
20570644

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