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Items: 1 to 20 of 105

1.

MicroRNAs act complementarily to regulate disease-related mRNA modules in human diseases.

Chavali S, Bruhn S, Tiemann K, Saetrom P, Barrenäs F, Saito T, Kanduri K, Wang H, Benson M.

RNA. 2013 Nov;19(11):1552-62. doi: 10.1261/rna.038414.113. Epub 2013 Sep 23.

2.

Computational identification of hepatitis C virus associated microRNA-mRNA regulatory modules in human livers.

Peng X, Li Y, Walters KA, Rosenzweig ER, Lederer SL, Aicher LD, Proll S, Katze MG.

BMC Genomics. 2009 Aug 11;10:373. doi: 10.1186/1471-2164-10-373.

3.
4.

Module network inference from a cancer gene expression data set identifies microRNA regulated modules.

Bonnet E, Tatari M, Joshi A, Michoel T, Marchal K, Berx G, Van de Peer Y.

PLoS One. 2010 Apr 14;5(4):e10162. doi: 10.1371/journal.pone.0010162.

5.

An in silico analysis of dynamic changes in microRNA expression profiles in stepwise development of nasopharyngeal carcinoma.

Luo Z, Zhang L, Li Z, Li X, Li G, Yu H, Jiang C, Dai Y, Guo X, Xiang J, Li G.

BMC Med Genomics. 2012 Jan 19;5:3. doi: 10.1186/1755-8794-5-3.

6.

Detecting pan-cancer conserved microRNA modules from microRNA expression profiles across multiple cancers.

Liu Z, Zhang J, Yuan X, Liu B, Liu Y, Li A, Zhang Y, Sun X, Tuo S.

Mol Biosyst. 2015 Aug;11(8):2227-37. doi: 10.1039/c5mb00257e.

PMID:
26052692
7.

Bioinformatics method to predict two regulation mechanism: TF-miRNA-mRNA and lncRNA-miRNA-mRNA in pancreatic cancer.

Ye S, Yang L, Zhao X, Song W, Wang W, Zheng S.

Cell Biochem Biophys. 2014 Dec;70(3):1849-58. doi: 10.1007/s12013-014-0142-y.

PMID:
25087086
8.

Crucial microRNAs and genes of human primary breast cancer explored by microRNA-mRNA integrated analysis.

Yang Y, Xing Y, Liang C, Hu L, Xu F, Chen Y.

Tumour Biol. 2015 Jul;36(7):5571-9. doi: 10.1007/s13277-015-3227-3. Epub 2015 Feb 14.

PMID:
25680412
9.

Identifying microRNA-mRNA regulatory network in colorectal cancer by a combination of expression profile and bioinformatics analysis.

Fu J, Tang W, Du P, Wang G, Chen W, Li J, Zhu Y, Gao J, Cui L.

BMC Syst Biol. 2012 Jun 15;6:68. doi: 10.1186/1752-0509-6-68.

10.

Identification of miRNA-mRNA regulatory modules by exploring collective group relationships.

Masud Karim SM, Liu L, Le TD, Li J.

BMC Genomics. 2016 Jan 11;17 Suppl 1:7. doi: 10.1186/s12864-015-2300-z.

11.

miRNA-mRNA correlation-network modules in human prostate cancer and the differences between primary and metastatic tumor subtypes.

Zhang W, Edwards A, Fan W, Flemington EK, Zhang K.

PLoS One. 2012;7(6):e40130. doi: 10.1371/journal.pone.0040130. Epub 2012 Jun 29.

12.

Identifying dysfunctional miRNA-mRNA regulatory modules by inverse activation, cofunction, and high interconnection of target genes: a case study of glioblastoma.

Xiao Y, Ping Y, Fan H, Xu C, Guan J, Zhao H, Li Y, Lv Y, Jin Y, Wang L, Li X.

Neuro Oncol. 2013 Jul;15(7):818-28. doi: 10.1093/neuonc/not018. Epub 2013 Mar 20.

13.

Integrated profiling of microRNAs and mRNAs: microRNAs located on Xq27.3 associate with clear cell renal cell carcinoma.

Zhou L, Chen J, Li Z, Li X, Hu X, Huang Y, Zhao X, Liang C, Wang Y, Sun L, Shi M, Xu X, Shen F, Chen M, Han Z, Peng Z, Zhai Q, Chen J, Zhang Z, Yang R, Ye J, Guan Z, Yang H, Gui Y, Wang J, Cai Z, Zhang X.

PLoS One. 2010 Dec 30;5(12):e15224. doi: 10.1371/journal.pone.0015224.

14.

Reconstructing the coding and non-coding RNA regulatory networks of miRNAs and mRNAs in breast cancer.

Yang S, Zhang H, Guo L, Zhao Y, Chen F.

Gene. 2014 Sep 10;548(1):6-13. doi: 10.1016/j.gene.2014.06.010. Epub 2014 Jun 27.

PMID:
24979338
15.

Discovery and visualization of miRNA-mRNA functional modules within integrated data using bicluster analysis.

Bryan K, Terrile M, Bray IM, Domingo-Fernandéz R, Watters KM, Koster J, Versteeg R, Stallings RL.

Nucleic Acids Res. 2014 Feb;42(3):e17. doi: 10.1093/nar/gkt1318. Epub 2013 Dec 18.

16.

Identification of potential biomarkers for clear cell renal cell carcinoma based on microRNA-mRNA pathway relationships.

Hao JF, Ren KM, Bai JX, Wang SN, Shao B, Cao N, Li X.

J Cancer Res Ther. 2014 Nov;10 Suppl:C167-77. doi: 10.4103/0973-1482.145856.

17.

Identification of microRNA-mRNA modules using microarray data.

Jayaswal V, Lutherborrow M, Ma DD, Yang YH.

BMC Genomics. 2011 Mar 6;12:138. doi: 10.1186/1471-2164-12-138.

18.

Exploring complex miRNA-mRNA interactions with Bayesian networks by splitting-averaging strategy.

Liu B, Li J, Tsykin A, Liu L, Gaur AB, Goodall GJ.

BMC Bioinformatics. 2009 Dec 10;10:408. doi: 10.1186/1471-2105-10-408.

19.

miRConnect 2.0: identification of oncogenic, antagonistic miRNA families in three human cancers.

Hua Y, Larsen N, Kalyana-Sundaram S, Kjems J, Chinnaiyan AM, Peter ME.

BMC Genomics. 2013 Mar 15;14:179. doi: 10.1186/1471-2164-14-179.

20.

Gene expression networks in COPD: microRNA and mRNA regulation.

Ezzie ME, Crawford M, Cho JH, Orellana R, Zhang S, Gelinas R, Batte K, Yu L, Nuovo G, Galas D, Diaz P, Wang K, Nana-Sinkam SP.

Thorax. 2012 Feb;67(2):122-31. doi: 10.1136/thoraxjnl-2011-200089. Epub 2011 Sep 22.

PMID:
21940491

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