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Items: 1 to 20 of 114

1.

Molecular tools for investigating microbial community structure and function in oxygen-deficient marine waters.

Hawley AK, Kheirandish S, Mueller A, Leung HT, Norbeck AD, Brewer HM, Pasa-Tolic L, Hallam SJ.

Methods Enzymol. 2013;531:305-29. doi: 10.1016/B978-0-12-407863-5.00016-2.

PMID:
24060128
2.

Metaproteomics reveals differential modes of metabolic coupling among ubiquitous oxygen minimum zone microbes.

Hawley AK, Brewer HM, Norbeck AD, Paša-Tolić L, Hallam SJ.

Proc Natl Acad Sci U S A. 2014 Aug 5;111(31):11395-400. doi: 10.1073/pnas.1322132111.

3.

Microbial community dynamics in a seasonally anoxic fjord: Saanich Inlet, British Columbia.

Zaikova E, Walsh DA, Stilwell CP, Mohn WW, Tortell PD, Hallam SJ.

Environ Microbiol. 2010 Jan;12(1):172-91. doi: 10.1111/j.1462-2920.2009.02058.x.

PMID:
19788414
4.

Microbial metatranscriptomics in a permanent marine oxygen minimum zone.

Stewart FJ, Ulloa O, DeLong EF.

Environ Microbiol. 2012 Jan;14(1):23-40. doi: 10.1111/j.1462-2920.2010.02400.x.

PMID:
21210935
5.

Denitrifying bacterial community composition changes associated with stages of denitrification in oxygen minimum zones.

Jayakumar A, O'Mullan GD, Naqvi SW, Ward BB.

Microb Ecol. 2009 Aug;58(2):350-62. doi: 10.1007/s00248-009-9487-y.

PMID:
19238477
6.

Microbial community phylogenetic and trait diversity declines with depth in a marine oxygen minimum zone.

Bryant JA, Stewart FJ, Eppley JM, DeLong EF.

Ecology. 2012 Jul;93(7):1659-73.

PMID:
22919912
7.

Bacterial diversity in the oxygen minimum zone of the eastern tropical South Pacific.

Stevens H, Ulloa O.

Environ Microbiol. 2008 May;10(5):1244-59. doi: 10.1111/j.1462-2920.2007.01539.x.

PMID:
18294206
8.

Microbial community structure across fluid gradients in the Juan de Fuca Ridge hydrothermal system.

Anderson RE, Beltrán MT, Hallam SJ, Baross JA.

FEMS Microbiol Ecol. 2013 Feb;83(2):324-39. doi: 10.1111/j.1574-6941.2012.01478.x.

9.

Thaumarchaeotal signature gene distribution in sediments of the northern South China Sea: an indicator of the metabolic intersection of the marine carbon, nitrogen, and phosphorus cycles?

Dang H, Zhou H, Yang J, Ge H, Jiao N, Luan X, Zhang C, Klotz MG.

Appl Environ Microbiol. 2013 Apr;79(7):2137-47. doi: 10.1128/AEM.03204-12.

10.

Diversity and function in microbial mats from the Lucky Strike hydrothermal vent field.

Crépeau V, Cambon Bonavita MA, Lesongeur F, Randrianalivelo H, Sarradin PM, Sarrazin J, Godfroy A.

FEMS Microbiol Ecol. 2011 Jun;76(3):524-40. doi: 10.1111/j.1574-6941.2011.01070.x.

11.

Niche segregation of ammonia-oxidizing archaea and anammox bacteria in the Arabian Sea oxygen minimum zone.

Pitcher A, Villanueva L, Hopmans EC, Schouten S, Reichart GJ, Sinninghe Damsté JS.

ISME J. 2011 Dec;5(12):1896-904. doi: 10.1038/ismej.2011.60.

12.

Metagenomic analysis of size-fractionated picoplankton in a marine oxygen minimum zone.

Ganesh S, Parris DJ, DeLong EF, Stewart FJ.

ISME J. 2014 Jan;8(1):187-211. doi: 10.1038/ismej.2013.144.

13.

Microbial diversity and stratification of South Pacific abyssal marine sediments.

Durbin AM, Teske A.

Environ Microbiol. 2011 Dec;13(12):3219-34. doi: 10.1111/j.1462-2920.2011.02544.x.

PMID:
21895908
14.

Phylogenetic molecular ecological network of soil microbial communities in response to elevated CO2.

Zhou J, Deng Y, Luo F, He Z, Yang Y.

MBio. 2011 Jul 26;2(4). pii: e00122-11. doi: 10.1128/mBio.00122-11.

15.

Archaeal enrichment in the hypoxic zone in the northern Gulf of Mexico.

Gillies LE, Thrash JC, deRada S, Rabalais NN, Mason OU.

Environ Microbiol. 2015 Oct;17(10):3847-56. doi: 10.1111/1462-2920.12853.

PMID:
25818237
16.

Ammonia-oxidizing beta-proteobacteria from the oxygen minimum zone off northern Chile.

Molina V, Ulloa O, Farías L, Urrutia H, Ramírez S, Junier P, Witzel KP.

Appl Environ Microbiol. 2007 Jun;73(11):3547-55.

17.

Activity, abundance and diversity of nitrifying archaea and bacteria in the central California Current.

Santoro AE, Casciotti KL, Francis CA.

Environ Microbiol. 2010 Jul;12(7):1989-2006. doi: 10.1111/j.1462-2920.2010.02205.x.

PMID:
20345944
18.

Giant hydrogen sulfide plume in the oxygen minimum zone off Peru supports chemolithoautotrophy.

Schunck H, Lavik G, Desai DK, Großkopf T, Kalvelage T, Löscher CR, Paulmier A, Contreras S, Siegel H, Holtappels M, Rosenstiel P, Schilhabel MB, Graco M, Schmitz RA, Kuypers MM, Laroche J.

PLoS One. 2013 Aug 21;8(8):e68661. doi: 10.1371/journal.pone.0068661.

19.

Genomic properties of Marine Group A bacteria indicate a role in the marine sulfur cycle.

Wright JJ, Mewis K, Hanson NW, Konwar KM, Maas KR, Hallam SJ.

ISME J. 2014 Feb;8(2):455-68. doi: 10.1038/ismej.2013.152.

20.

Comparative microbial diversity analyses of modern marine thrombolitic mats by barcoded pyrosequencing.

Mobberley JM, Ortega MC, Foster JS.

Environ Microbiol. 2012 Jan;14(1):82-100. doi: 10.1111/j.1462-2920.2011.02509.x.

PMID:
21658172
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