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Items: 1 to 20 of 106

1.

Flexibility of the bacterial chaperone trigger factor in microsecond-timescale molecular dynamics simulations.

Thomas AS, Mao S, Elcock AH.

Biophys J. 2013 Aug 6;105(3):732-44. doi: 10.1016/j.bpj.2013.06.028.

2.

Dynamic Behavior of Trigger Factor on the Ribosome.

Deeng J, Chan KY, van der Sluis EO, Berninghausen O, Han W, Gumbart J, Schulten K, Beatrix B, Beckmann R.

J Mol Biol. 2016 Sep 11;428(18):3588-602. doi: 10.1016/j.jmb.2016.06.007. Epub 2016 Jun 16.

PMID:
27320387
3.

Molecular mechanism and structure of Trigger Factor bound to the translating ribosome.

Merz F, Boehringer D, Schaffitzel C, Preissler S, Hoffmann A, Maier T, Rutkowska A, Lozza J, Ban N, Bukau B, Deuerling E.

EMBO J. 2008 Jun 4;27(11):1622-32. doi: 10.1038/emboj.2008.89. Epub 2008 May 22.

4.

Binding specificity of Escherichia coli trigger factor.

Patzelt H, Rüdiger S, Brehmer D, Kramer G, Vorderwülbecke S, Schaffitzel E, Waitz A, Hesterkamp T, Dong L, Schneider-Mergener J, Bukau B, Deuerling E.

Proc Natl Acad Sci U S A. 2001 Dec 4;98(25):14244-9. Epub 2001 Nov 27.

5.

Functional dissection of Escherichia coli trigger factor: unraveling the function of individual domains.

Kramer G, Rutkowska A, Wegrzyn RD, Patzelt H, Kurz TA, Merz F, Rauch T, Vorderwülbecke S, Deuerling E, Bukau B.

J Bacteriol. 2004 Jun;186(12):3777-84.

6.

Single-molecule dynamics of the molecular chaperone trigger factor in living cells.

Yang F, Chen TY, Krzemiński Ł, Santiago AG, Jung W, Chen P.

Mol Microbiol. 2016 Dec;102(6):992-1003. doi: 10.1111/mmi.13529. Epub 2016 Sep 30.

7.

Conformational dynamics of Peb4 exhibit "mother's arms" chain model: a molecular dynamics study.

Dantu SC, Khavnekar S, Kale A.

J Biomol Struct Dyn. 2017 Aug;35(10):2186-2196. doi: 10.1080/07391102.2016.1209131. Epub 2016 Jul 19.

PMID:
27434141
8.

Versatility of trigger factor interactions with ribosome-nascent chain complexes.

Lakshmipathy SK, Gupta R, Pinkert S, Etchells SA, Hartl FU.

J Biol Chem. 2010 Sep 3;285(36):27911-23. doi: 10.1074/jbc.M110.134163. Epub 2010 Jul 1.

9.

Real-time observation of trigger factor function on translating ribosomes.

Kaiser CM, Chang HC, Agashe VR, Lakshmipathy SK, Etchells SA, Hayer-Hartl M, Hartl FU, Barral JM.

Nature. 2006 Nov 23;444(7118):455-60. Epub 2006 Oct 15.

PMID:
17051157
10.

PPIase domain of trigger factor acts as auxiliary chaperone site to assist the folding of protein substrates bound to the crevice of trigger factor.

Liu CP, Zhou QM, Fan DJ, Zhou JM.

Int J Biochem Cell Biol. 2010 Jun;42(6):890-901. doi: 10.1016/j.biocel.2010.01.019. Epub 2010 Jan 21.

PMID:
20096367
11.

Chaperone binding at the ribosomal exit tunnel.

Kristensen O, Gajhede M.

Structure. 2003 Dec;11(12):1547-56.

12.

NMR assignments of the peptidyl-prolyl cis-trans isomerase domain of trigger factor from E. coli.

Huang CT, Hsu ST.

Biomol NMR Assign. 2016 Apr;10(1):149-52. doi: 10.1007/s12104-015-9655-6. Epub 2015 Nov 2.

PMID:
26527152
13.

Identification of nascent chain interaction sites on trigger factor.

Lakshmipathy SK, Tomic S, Kaiser CM, Chang HC, Genevaux P, Georgopoulos C, Barral JM, Johnson AE, Hartl FU, Etchells SA.

J Biol Chem. 2007 Apr 20;282(16):12186-93. Epub 2007 Feb 12.

14.

L23 protein functions as a chaperone docking site on the ribosome.

Kramer G, Rauch T, Rist W, Vorderwülbecke S, Patzelt H, Schulze-Specking A, Ban N, Deuerling E, Bukau B.

Nature. 2002 Sep 12;419(6903):171-4.

PMID:
12226666
15.
16.

Three-state equilibrium of Escherichia coli trigger factor.

Patzelt H, Kramer G, Rauch T, Schönfeld HJ, Bukau B, Deuerling E.

Biol Chem. 2002 Oct;383(10):1611-9.

PMID:
12452438
17.

Comparison of Secondary Structure Formation Using 10 Different Force Fields in Microsecond Molecular Dynamics Simulations.

Cino EA, Choy WY, Karttunen M.

J Chem Theory Comput. 2012 Aug 14;8(8):2725-2740. Epub 2012 Jun 19.

18.

Trigger factor peptidyl-prolyl cis/trans isomerase activity is not essential for the folding of cytosolic proteins in Escherichia coli.

Kramer G, Patzelt H, Rauch T, Kurz TA, Vorderwülbecke S, Bukau B, Deuerling E.

J Biol Chem. 2004 Apr 2;279(14):14165-70. Epub 2004 Jan 16.

19.

Conformational dynamics of bacterial trigger factor in apo and ribosome-bound states.

Can MT, Kurkcuoglu Z, Ezeroglu G, Uyar A, Kurkcuoglu O, Doruker P.

PLoS One. 2017 Apr 24;12(4):e0176262. doi: 10.1371/journal.pone.0176262. eCollection 2017.

20.

Identification of a potential hydrophobic peptide binding site in the C-terminal arm of trigger factor.

Shi Y, Fan DJ, Li SX, Zhang HJ, Perrett S, Zhou JM.

Protein Sci. 2007 Jun;16(6):1165-75.

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